Difference between revisions of "TSS:Hg 114454.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=129 | |distance_to_tss=129 | ||
|end=60280681 | |end=60280681 | ||
| + | |end_of_center_position=60280670 | ||
|entrez_id=51338 | |entrez_id=51338 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| − | |gene_alias=4SPAN1 | + | |gene_alias=4SPAN1 |
|gene_description=membrane spanning 4-domains A4A | |gene_description=membrane spanning 4-domains A4A | ||
|gene_id=51338 | |gene_id=51338 | ||
| Line 29: | Line 30: | ||
|species=human | |species=human | ||
|start=60280658 | |start=60280658 | ||
| + | |start_of_center_position=60280669 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000527056.5 uc058btp.1 BC020648 CU676600 KJ893892 DQ891395 DQ894573 AB022821 | |transcript_name=ENST00000527056.5 uc058btp.1 BC020648 CU676600 KJ893892 DQ891395 DQ894573 AB022821 | ||
Revision as of 16:59, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60280669 |
|---|---|
| End of the center position in the TSS region: | 60280670 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000527056.5 uc058btp.1 BC020648 CU676600 KJ893892 DQ891395 DQ894573 AB022821 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000527056.5:0 uc058btp.1:0 BC020648:0 CU676600:0 KJ893892:0 DQ891395:0 DQ894573:0 AB022821:0 ENST00000343968.8:-3 uc058bto.1:-3 AK075081:-3 ENST00000529950.1:4 uc058btq.1:4 AK314033:17 AB013102:20 ENST00000337908.4:-73 uc001noz.4:-73 AK292089:-73 ENST00000532114.5:-118 NM_148975:-118 NM_001243266:-118 NM_024021:-118 uc001npc.4:-118 |
TATA-Box annotation
| Distance to TSS: | 129 |
|---|---|
| Nearest PromoterID: | NM_001243266 |
| Entrez ID: | 51338 |
| Nearest Unigene: | Hs.325960 |
| Nearest Refseq: | NM_024021 |
| Nearest Ensembl: | ENSG00000110079 |
| Gene Name: | membrane spanning 4-domains A4A |
| Gene Alias: | 4SPAN1 |
| Gene Description: | membrane spanning 4-domains A4A |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
