Difference between revisions of "TSS:Hg 121131.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=26495 | |distance_to_tss=26495 | ||
|end=72040820 | |end=72040820 | ||
| + | |end_of_center_position=72040786 | ||
|entrez_id=100128494 | |entrez_id=100128494 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=72040751 | |start=72040751 | ||
| + | |start_of_center_position=72040785 | ||
|strand=- | |strand=- | ||
|tata_box="-58(ATCCTTAAAGGG,-,0.00),-56(CCTTAAAGGGGA,+,0.00)" | |tata_box="-58(ATCCTTAAAGGG,-,0.00),-56(CCTTAAAGGGGA,+,0.00)" | ||
Revision as of 20:23, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 72040785 |
|---|---|
| End of the center position in the TSS region: | 72040786 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000535947.5 uc058exx.1 |
|---|---|
| Distance: | 42 |
| Num_trans: | 8 |
| All_trans: | ENST00000535947.5:42 uc058exx.1:42 AK290509:-259 ENST00000536119.5:-266 uc058exr.1:-266 AK309041:-266 ENST00000542977.5:-317 uc058exo.1:-317 |
TATA-Box annotation
| Distance to TSS: | 26495 |
|---|---|
| Nearest PromoterID: | NR_104178 |
| Entrez ID: | 100128494 |
| Nearest Unigene: | Hs.713607 |
| Nearest Refseq: | NR_104178 |
| Nearest Ensembl: | ENSG00000251143 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128494 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-58(ATCCTTAAAGGG,-,0.00),-56(CCTTAAAGGGGA,+,0.00)" |
