Difference between revisions of "TSS:Hg 121135.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=26890 | |distance_to_tss=26890 | ||
|end=72041186 | |end=72041186 | ||
| + | |end_of_center_position=72041181 | ||
|entrez_id=100128494 | |entrez_id=100128494 | ||
|gc_percent=0.61194 | |gc_percent=0.61194 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=72041175 | |start=72041175 | ||
| + | |start_of_center_position=72041180 | ||
|strand=- | |strand=- | ||
|tata_box="11(TGCCTTTAAAGA,-,0.00),12(GCCTTTAAAGAA,+,0.00),12(GCCTTTAAAGAA,-,0.00)" | |tata_box="11(TGCCTTTAAAGA,-,0.00),12(GCCTTTAAAGAA,+,0.00),12(GCCTTTAAAGAA,-,0.00)" | ||
Revision as of 20:24, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 72041180 |
|---|---|
| End of the center position in the TSS region: | 72041181 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000542977.5 uc058exo.1 |
|---|---|
| Distance: | 39 |
| Num_trans: | 10 |
| All_trans: | ENST00000542977.5:39 uc058exo.1:39 ENST00000536119.5:90 uc058exr.1:90 AK309041:90 AK290509:97 ENST00000544238.5:-339 uc058exs.1:-339 ENST00000535947.5:466 uc058exx.1:466 |
TATA-Box annotation
| Distance to TSS: | 26890 |
|---|---|
| Nearest PromoterID: | NR_104178 |
| Entrez ID: | 100128494 |
| Nearest Unigene: | Hs.713607 |
| Nearest Refseq: | NR_104178 |
| Nearest Ensembl: | ENSG00000251143 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128494 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "11(TGCCTTTAAAGA,-,0.00),12(GCCTTTAAAGAA,+,0.00),12(GCCTTTAAAGAA,-,0.00)" |
