Difference between revisions of "TSS:Mm 115923.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK088581:-11 |chr=chr13 |cpg_percent=0.03 |distance=-11 |distance_to_tss=1087 |end=23556123 |entrez_id=14957 |gc_percent=0.467662 |gene_alias=H1.3|H1D|H...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |H1D= | ||
| + | |H1f3= | ||
| + | |H1s-4= | ||
|all_trans=AK088581:-11 | |all_trans=AK088581:-11 | ||
|chr=chr13 | |chr=chr13 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=1087 | |distance_to_tss=1087 | ||
|end=23556123 | |end=23556123 | ||
| + | |end_of_center_position=23556119 | ||
|entrez_id=14957 | |entrez_id=14957 | ||
|gc_percent=0.467662 | |gc_percent=0.467662 | ||
| − | |gene_alias=H1.3 | + | |gene_alias=H1.3 |
|gene_description="histone cluster 1, H1d" | |gene_description="histone cluster 1, H1d" | ||
|gene_id=100034673 | |gene_id=100034673 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=23556114 | |start=23556114 | ||
| + | |start_of_center_position=23556118 | ||
|strand=- | |strand=- | ||
|transcript_name=AK088581 | |transcript_name=AK088581 | ||
Revision as of 22:36, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23556118 |
|---|---|
| End of the center position in the TSS region: | 23556119 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK088581 |
|---|---|
| Distance: | -11 |
| Num_trans: | 1 |
| All_trans: | AK088581:-11 |
TATA-Box annotation
| Distance to TSS: | 1087 |
|---|---|
| Nearest PromoterID: | NM_145713 |
| Entrez ID: | 14957 |
| Nearest Unigene: | Mm.247046 |
| Nearest Refseq: | NM_145713 |
| Nearest Ensembl: | ENSMUSG00000052565 |
| Gene Name: | RIKEN cDNA E430020M11 gene |
| Gene Alias: | H1.3 |
| Gene Description: | "histone cluster 1, H1d" |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.467662 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
