Difference between revisions of "TSS:Hg 35995.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK057559:-240 ENST00000421492.5:309 uc062hzo.1:309 ENST00000428373.5:-355 uc003cfz.5:-355 BC041385:-355 |chr=chr3 |cpg_percent=0.105 |distance=-240 |dis...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |R3HDM3= | ||
| + | |RCS= | ||
| + | |TARPP= | ||
|all_trans=AK057559:-240 ENST00000421492.5:309 uc062hzo.1:309 ENST00000428373.5:-355 uc003cfz.5:-355 BC041385:-355 | |all_trans=AK057559:-240 ENST00000421492.5:309 uc062hzo.1:309 ENST00000428373.5:-355 uc003cfz.5:-355 BC041385:-355 | ||
|chr=chr3 | |chr=chr3 | ||
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|distance_to_tss=771 | |distance_to_tss=771 | ||
|end=35639946 | |end=35639946 | ||
| + | |end_of_center_position=35639945 | ||
|entrez_id=10777 | |entrez_id=10777 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=ARPP-21 | + | |gene_alias=ARPP-21 |
|gene_description=cAMP regulated phosphoprotein 21 | |gene_description=cAMP regulated phosphoprotein 21 | ||
|gene_id=100130503 | |gene_id=100130503 | ||
| Line 24: | Line 28: | ||
|species=human | |species=human | ||
|start=35639943 | |start=35639943 | ||
| + | |start_of_center_position=35639944 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK057559 | |transcript_name=AK057559 | ||
Revision as of 01:44, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 35639944 |
|---|---|
| End of the center position in the TSS region: | 35639945 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK057559 |
|---|---|
| Distance: | -240 |
| Num_trans: | 6 |
| All_trans: | AK057559:-240 ENST00000421492.5:309 uc062hzo.1:309 ENST00000428373.5:-355 uc003cfz.5:-355 BC041385:-355 |
TATA-Box annotation
| Distance to TSS: | 771 |
|---|---|
| Nearest PromoterID: | NM_001267616 |
| Entrez ID: | 10777 |
| Nearest Unigene: | Hs.475902 |
| Nearest Refseq: | NM_016300 |
| Nearest Ensembl: | ENSG00000172995 |
| Gene Name: | uncharacterized LOC100130503 |
| Gene Alias: | ARPP-21 |
| Gene Description: | cAMP regulated phosphoprotein 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
