Difference between revisions of "TSS:Hg 123264.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=JF432542:101 KJ893679:101 AK308498:-247 ENST00000392595.6:-250 uc001qhg.4:-250 AF087886:-250 ENST00000525677.1:-303 uc058jht.1:-303 AF182413:-307 AF1614...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |MDS012= | ||
| + | |MY105= | ||
| + | |THY28= | ||
| + | |THY28KD= | ||
|all_trans=JF432542:101 KJ893679:101 AK308498:-247 ENST00000392595.6:-250 uc001qhg.4:-250 AF087886:-250 ENST00000525677.1:-303 uc058jht.1:-303 AF182413:-307 AF161493:-328 AF059619:-340 BC093074:-343 ENST00000341541.7:-346 uc001qhh.4:-346 ENST00000533975.1:-350 uc058jhr.1:-350 AK311024:-350 ENST00000352327.5:-352 uc001qhj.4:-352 BC006978:-352 ENST00000531135.5:-355 uc058jhq.1:-355 NM_001037305:-368 NM_001037304:-368 NM_014174:-368 NM_199298:-368 NM_199297:-368 ENST00000392594.7:-372 uc001qhf.4:-372 | |all_trans=JF432542:101 KJ893679:101 AK308498:-247 ENST00000392595.6:-250 uc001qhg.4:-250 AF087886:-250 ENST00000525677.1:-303 uc058jht.1:-303 AF182413:-307 AF161493:-328 AF059619:-340 BC093074:-343 ENST00000341541.7:-346 uc001qhh.4:-346 ENST00000533975.1:-350 uc058jhr.1:-350 AK311024:-350 ENST00000352327.5:-352 uc001qhj.4:-352 BC006978:-352 ENST00000531135.5:-355 uc058jhq.1:-355 NM_001037305:-368 NM_001037304:-368 NM_014174:-368 NM_199298:-368 NM_199297:-368 ENST00000392594.7:-372 uc001qhf.4:-372 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=375 | |distance_to_tss=375 | ||
|end=134252998 | |end=134252998 | ||
| + | |end_of_center_position=134252991 | ||
|entrez_id=29087 | |entrez_id=29087 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=HSPC144 | + | |gene_alias=HSPC144 |
|gene_description=thymocyte nuclear protein 1 | |gene_description=thymocyte nuclear protein 1 | ||
|gene_id=29087 | |gene_id=29087 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=134252983 | |start=134252983 | ||
| + | |start_of_center_position=134252990 | ||
|strand=- | |strand=- | ||
|transcript_name=JF432542 KJ893679 | |transcript_name=JF432542 KJ893679 | ||
Revision as of 01:45, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 134252990 |
|---|---|
| End of the center position in the TSS region: | 134252991 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | JF432542 KJ893679 |
|---|---|
| Distance: | 101 |
| Num_trans: | 29 |
| All_trans: | JF432542:101 KJ893679:101 AK308498:-247 ENST00000392595.6:-250 uc001qhg.4:-250 AF087886:-250 ENST00000525677.1:-303 uc058jht.1:-303 AF182413:-307 AF161493:-328 AF059619:-340 BC093074:-343 ENST00000341541.7:-346 uc001qhh.4:-346 ENST00000533975.1:-350 uc058jhr.1:-350 AK311024:-350 ENST00000352327.5:-352 uc001qhj.4:-352 BC006978:-352 ENST00000531135.5:-355 uc058jhq.1:-355 NM_001037305:-368 NM_001037304:-368 NM_014174:-368 NM_199298:-368 NM_199297:-368 ENST00000392594.7:-372 uc001qhf.4:-372 |
TATA-Box annotation
| Distance to TSS: | 375 |
|---|---|
| Nearest PromoterID: | NM_001037305 |
| Entrez ID: | 29087 |
| Nearest Unigene: | Hs.13645 |
| Nearest Refseq: | NM_014174 |
| Nearest Ensembl: | ENSG00000151500 |
| Gene Name: | thymocyte nuclear protein 1 |
| Gene Alias: | HSPC144 |
| Gene Description: | thymocyte nuclear protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
