Difference between revisions of "TSS:Hg 129648.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000279575.5:0 ENST00000621732.4:0 ENST00000535904.5:0 ENST00000445719.2:0 NM_002723:0 NM_001261399:0 uc001qzt.5:0 uc031qgh.2:0 uc058lgv.1:0 uc058l...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=6 | |distance_to_tss=6 | ||
|end=11310438 | |end=11310438 | ||
| + | |end_of_center_position=11310429 | ||
|entrez_id=5545 | |entrez_id=5545 | ||
|gc_percent=0.552239 | |gc_percent=0.552239 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=11310419 | |start=11310419 | ||
| + | |start_of_center_position=11310428 | ||
|strand=- | |strand=- | ||
|tata_box="-39(CTCTTTATAAAG,-,0.00),-37(CTTTATAAAGGG,+,0.00),-37(CTTTATAAAGGG,-,0.00)" | |tata_box="-39(CTCTTTATAAAG,-,0.00),-37(CTTTATAAAGGG,+,0.00),-37(CTTTATAAAGGG,-,0.00)" | ||
Revision as of 04:05, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11310428 |
|---|---|
| End of the center position in the TSS region: | 11310429 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000279575.5 ENST00000621732.4 ENST00000535904.5 ENST00000445719.2 NM_002723 NM_001261399 uc001qzt.5 uc031qgh.2 uc058lgv.1 uc058lgw.1 K03207 BC128191 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000279575.5:0 ENST00000621732.4:0 ENST00000535904.5:0 ENST00000445719.2:0 NM_002723:0 NM_001261399:0 uc001qzt.5:0 uc031qgh.2:0 uc058lgv.1:0 uc058lgw.1:0 K03207:0 BC128191:0 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001261399 |
| Entrez ID: | 5545 |
| Nearest Unigene: | Hs.528651 |
| Nearest Refseq: | NM_002723 |
| Nearest Ensembl: | ENSG00000230657 |
| Gene Name: | proline-rich protein BstNI subfamily 4 |
| Gene Alias: | Po |
| Gene Description: | proline rich protein BstNI subfamily 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-39(CTCTTTATAAAG,-,0.00),-37(CTTTATAAAGGG,+,0.00),-37(CTTTATAAAGGG,-,0.00)" |
