Difference between revisions of "TSS:Hg 220791.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=X04347:240 ENST00000550482.1:255 uc058ovu.1:255 BC104236:326 BC104237:326 BC035253:485 |chr=chr12 |cpg_percent=0.005 |distance=240 |distance_to_tss=1253...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ALS20= | ||
| + | |HNRPA1= | ||
| + | |HNRPA1L3= | ||
| + | |IBMPFD3= | ||
| + | |UP 1= | ||
|all_trans=X04347:240 ENST00000550482.1:255 uc058ovu.1:255 BC104236:326 BC104237:326 BC035253:485 | |all_trans=X04347:240 ENST00000550482.1:255 uc058ovu.1:255 BC104236:326 BC104237:326 BC035253:485 | ||
|chr=chr12 | |chr=chr12 | ||
| Line 6: | Line 11: | ||
|distance_to_tss=1253 | |distance_to_tss=1253 | ||
|end=54281943 | |end=54281943 | ||
| + | |end_of_center_position=54281943 | ||
|entrez_id=3178 | |entrez_id=3178 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=ALS19 | + | |gene_alias=ALS19 |
|gene_description=heterogeneous nuclear ribonucleoprotein A1 | |gene_description=heterogeneous nuclear ribonucleoprotein A1 | ||
|gene_id=3178 | |gene_id=3178 | ||
| Line 17: | Line 23: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:5031 | |hgnc_mgi_id=HGNC:5031 | ||
| + | |hnRNP A1= | ||
| + | |hnRNP-A1= | ||
|nearest_ensembl=ENSG00000135486 | |nearest_ensembl=ENSG00000135486 | ||
|nearest_promoter_id=NM_002136 | |nearest_promoter_id=NM_002136 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=54281942 | |start=54281942 | ||
| + | |start_of_center_position=54281942 | ||
|strand=+ | |strand=+ | ||
|transcript_name=X04347 | |transcript_name=X04347 | ||
Revision as of 08:37, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 54281942 |
|---|---|
| End of the center position in the TSS region: | 54281943 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | X04347 |
|---|---|
| Distance: | 240 |
| Num_trans: | 6 |
| All_trans: | X04347:240 ENST00000550482.1:255 uc058ovu.1:255 BC104236:326 BC104237:326 BC035253:485 |
TATA-Box annotation
| Distance to TSS: | 1253 |
|---|---|
| Nearest PromoterID: | NM_002136 |
| Entrez ID: | 3178 |
| Nearest Unigene: | Hs.546261 |
| Nearest Refseq: | NM_002136 |
| Nearest Ensembl: | ENSG00000135486 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein A1 |
| Gene Alias: | ALS19 |
| Gene Description: | heterogeneous nuclear ribonucleoprotein A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
