Difference between revisions of "TSS:Hg 234427.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=KJ901545:-160 EU832356:-161 EU832441:-161 CU692074:-161 X07695:175 BC042174:-180 X67683:-180 BC012867:-205 ENST00000548097.5:-217 ENST00000552668.1:-217...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CK4= | ||
| + | |CYK4= | ||
| + | |K4= | ||
| + | |WSN1= | ||
|all_trans=KJ901545:-160 EU832356:-161 EU832441:-161 CU692074:-161 X07695:175 BC042174:-180 X67683:-180 BC012867:-205 ENST00000548097.5:-217 ENST00000552668.1:-217 NM_002272:-217 uc058oio.1:-217 uc058oiq.1:-217 AK098110:-217 AK299451:-217 AK299394:-217 AK307941:-217 AK296582:-217 AK299400:-217 ENST00000551436.1:283 uc058oir.1:283 | |all_trans=KJ901545:-160 EU832356:-161 EU832441:-161 CU692074:-161 X07695:175 BC042174:-180 X67683:-180 BC012867:-205 ENST00000548097.5:-217 ENST00000552668.1:-217 NM_002272:-217 uc058oio.1:-217 uc058oiq.1:-217 AK098110:-217 AK299451:-217 AK299394:-217 AK307941:-217 AK296582:-217 AK299400:-217 ENST00000551436.1:283 uc058oir.1:283 | ||
|chr=chr12 | |chr=chr12 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=217 | |distance_to_tss=217 | ||
|end=52813899 | |end=52813899 | ||
| + | |end_of_center_position=54283905 | ||
|entrez_id=3851 | |entrez_id=3851 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=CK-4 | + | |gene_alias=CK-4 |
|gene_description=keratin 4 | |gene_description=keratin 4 | ||
|gene_name=KRT4 | |gene_name=KRT4 | ||
| Line 19: | Line 24: | ||
|species=human | |species=human | ||
|start=52813898 | |start=52813898 | ||
| + | |start_of_center_position=54283904 | ||
|strand=- | |strand=- | ||
|transcript_name=KJ901545 | |transcript_name=KJ901545 | ||
Revision as of 08:38, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 54283904 |
|---|---|
| End of the center position in the TSS region: | 54283905 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ901545 |
|---|---|
| Distance: | -160 |
| Num_trans: | 21 |
| All_trans: | KJ901545:-160 EU832356:-161 EU832441:-161 CU692074:-161 X07695:175 BC042174:-180 X67683:-180 BC012867:-205 ENST00000548097.5:-217 ENST00000552668.1:-217 NM_002272:-217 uc058oio.1:-217 uc058oiq.1:-217 AK098110:-217 AK299451:-217 AK299394:-217 AK307941:-217 AK296582:-217 AK299400:-217 ENST00000551436.1:283 uc058oir.1:283 |
TATA-Box annotation
| Distance to TSS: | 217 |
|---|---|
| Nearest PromoterID: | NM_002272 |
| Entrez ID: | 3851 |
| Nearest Unigene: | Hs.654610 |
| Nearest Refseq: | NM_002272 |
| Nearest Ensembl: | ENSG00000170477 |
| Gene Name: | KRT4 |
| Gene Alias: | CK-4 |
| Gene Description: | keratin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
