Difference between revisions of "TSS:Hg 234428.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=KJ901545:-142 EU832356:-143 EU832441:-143 CU692074:-143 BC042174:-162 X67683:-162 BC012867:-187 X07695:193 ENST00000548097.5:-199 ENST00000552668.1:-199...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CK4= | ||
| + | |CYK4= | ||
| + | |K4= | ||
| + | |WSN1= | ||
|all_trans=KJ901545:-142 EU832356:-143 EU832441:-143 CU692074:-143 BC042174:-162 X67683:-162 BC012867:-187 X07695:193 ENST00000548097.5:-199 ENST00000552668.1:-199 NM_002272:-199 uc058oio.1:-199 uc058oiq.1:-199 AK098110:-199 AK299451:-199 AK299394:-199 AK307941:-199 AK296582:-199 AK299400:-199 ENST00000551436.1:301 uc058oir.1:301 | |all_trans=KJ901545:-142 EU832356:-143 EU832441:-143 CU692074:-143 BC042174:-162 X67683:-162 BC012867:-187 X07695:193 ENST00000548097.5:-199 ENST00000552668.1:-199 NM_002272:-199 uc058oio.1:-199 uc058oiq.1:-199 AK098110:-199 AK299451:-199 AK299394:-199 AK307941:-199 AK296582:-199 AK299400:-199 ENST00000551436.1:301 uc058oir.1:301 | ||
|chr=chr12 | |chr=chr12 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=199 | |distance_to_tss=199 | ||
|end=52813917 | |end=52813917 | ||
| + | |end_of_center_position=54283934 | ||
|entrez_id=3851 | |entrez_id=3851 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=CK-4 | + | |gene_alias=CK-4 |
|gene_description=keratin 4 | |gene_description=keratin 4 | ||
|gene_name=KRT4 | |gene_name=KRT4 | ||
| Line 19: | Line 24: | ||
|species=human | |species=human | ||
|start=52813916 | |start=52813916 | ||
| + | |start_of_center_position=54283933 | ||
|strand=- | |strand=- | ||
|transcript_name=KJ901545 | |transcript_name=KJ901545 | ||
Revision as of 08:38, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 54283933 |
|---|---|
| End of the center position in the TSS region: | 54283934 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | KJ901545 |
|---|---|
| Distance: | -142 |
| Num_trans: | 21 |
| All_trans: | KJ901545:-142 EU832356:-143 EU832441:-143 CU692074:-143 BC042174:-162 X67683:-162 BC012867:-187 X07695:193 ENST00000548097.5:-199 ENST00000552668.1:-199 NM_002272:-199 uc058oio.1:-199 uc058oiq.1:-199 AK098110:-199 AK299451:-199 AK299394:-199 AK307941:-199 AK296582:-199 AK299400:-199 ENST00000551436.1:301 uc058oir.1:301 |
TATA-Box annotation
| Distance to TSS: | 199 |
|---|---|
| Nearest PromoterID: | NM_002272 |
| Entrez ID: | 3851 |
| Nearest Unigene: | Hs.654610 |
| Nearest Refseq: | NM_002272 |
| Nearest Ensembl: | ENSG00000170477 |
| Gene Name: | KRT4 |
| Gene Alias: | CK-4 |
| Gene Description: | keratin 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
