Difference between revisions of "TSS:Mm 64377.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000018963.10:0 ENSMUST00000105967.7:0 BC044736:0 AK003081:0 M89956:0 S74179:13 NM_001136071:-23 NM_001271510:-23 NM_001271509:-23 uc009knc.3:-2...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |WP34= | ||
|all_trans=ENSMUST00000018963.10:0 ENSMUST00000105967.7:0 BC044736:0 AK003081:0 M89956:0 S74179:13 NM_001136071:-23 NM_001271510:-23 NM_001271509:-23 uc009knc.3:-23 uc009knb.3:-23 uc009knd.3:-23 D49691:-23 ENSMUST00000105968.7:-26 | |all_trans=ENSMUST00000018963.10:0 ENSMUST00000105967.7:0 BC044736:0 AK003081:0 M89956:0 S74179:13 NM_001136071:-23 NM_001271510:-23 NM_001271509:-23 uc009knc.3:-23 uc009knb.3:-23 uc009knd.3:-23 D49691:-23 ENSMUST00000105968.7:-26 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=48 | |distance_to_tss=48 | ||
|end=142460886 | |end=142460886 | ||
| + | |end_of_center_position=142460861 | ||
|entrez_id=16985 | |entrez_id=16985 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=Lsp-1 | + | |gene_alias=Lsp-1 |
|gene_description=lymphocyte specific 1 | |gene_description=lymphocyte specific 1 | ||
|gene_id=16985 | |gene_id=16985 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Mm.234003 | |nearest_unigene=Mm.234003 | ||
|num_trans=14 | |num_trans=14 | ||
| + | |p50= | ||
| + | |pp52= | ||
|species=mouse | |species=mouse | ||
|start=142460834 | |start=142460834 | ||
| + | |start_of_center_position=142460860 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000018963.10 ENSMUST00000105967.7 BC044736 AK003081 M89956 | |transcript_name=ENSMUST00000018963.10 ENSMUST00000105967.7 BC044736 AK003081 M89956 | ||
Revision as of 10:13, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 142460860 |
|---|---|
| End of the center position in the TSS region: | 142460861 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000018963.10 ENSMUST00000105967.7 BC044736 AK003081 M89956 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENSMUST00000018963.10:0 ENSMUST00000105967.7:0 BC044736:0 AK003081:0 M89956:0 S74179:13 NM_001136071:-23 NM_001271510:-23 NM_001271509:-23 uc009knc.3:-23 uc009knb.3:-23 uc009knd.3:-23 D49691:-23 ENSMUST00000105968.7:-26 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_001136071 |
| Entrez ID: | 16985 |
| Nearest Unigene: | Mm.234003 |
| Nearest Refseq: | NM_019391 |
| Nearest Ensembl: | ENSMUSG00000018819 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | Lsp-1 |
| Gene Description: | lymphocyte specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
