Difference between revisions of "TSS:Mm 167187.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000038946.8:390 NM_019391:390 NM_001271508:390 uc009kne.1:390 uc009knf.2:390 uc009kng.2:390 M90316:390 ENSMUST00000128986.7:419 AK031587:419 |c...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |WP34= | ||
|all_trans=ENSMUST00000038946.8:390 NM_019391:390 NM_001271508:390 uc009kne.1:390 uc009knf.2:390 uc009kng.2:390 M90316:390 ENSMUST00000128986.7:419 AK031587:419 | |all_trans=ENSMUST00000038946.8:390 NM_019391:390 NM_001271508:390 uc009kne.1:390 uc009knf.2:390 uc009kng.2:390 M90316:390 ENSMUST00000128986.7:419 AK031587:419 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-399 | |distance_to_tss=-399 | ||
|end=142471453 | |end=142471453 | ||
| + | |end_of_center_position=142471444 | ||
|entrez_id=16985 | |entrez_id=16985 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=Lsp-1 | + | |gene_alias=Lsp-1 |
|gene_description=lymphocyte specific 1 | |gene_description=lymphocyte specific 1 | ||
|gene_id=16985 | |gene_id=16985 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Mm.234003 | |nearest_unigene=Mm.234003 | ||
|num_trans=9 | |num_trans=9 | ||
| + | |p50= | ||
| + | |pp52= | ||
|species=mouse | |species=mouse | ||
|start=142471434 | |start=142471434 | ||
| + | |start_of_center_position=142471443 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000038946.8 NM_019391 NM_001271508 uc009kne.1 uc009knf.2 uc009kng.2 M90316 | |transcript_name=ENSMUST00000038946.8 NM_019391 NM_001271508 uc009kne.1 uc009knf.2 uc009kng.2 M90316 | ||
Revision as of 10:13, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 142471443 |
|---|---|
| End of the center position in the TSS region: | 142471444 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000038946.8 NM_019391 NM_001271508 uc009kne.1 uc009knf.2 uc009kng.2 M90316 |
|---|---|
| Distance: | 390 |
| Num_trans: | 9 |
| All_trans: | ENSMUST00000038946.8:390 NM_019391:390 NM_001271508:390 uc009kne.1:390 uc009knf.2:390 uc009kng.2:390 M90316:390 ENSMUST00000128986.7:419 AK031587:419 |
TATA-Box annotation
| Distance to TSS: | -399 |
|---|---|
| Nearest PromoterID: | NM_001271508 |
| Entrez ID: | 16985 |
| Nearest Unigene: | Mm.234003 |
| Nearest Refseq: | NM_019391 |
| Nearest Ensembl: | ENSMUSG00000018819 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | Lsp-1 |
| Gene Description: | lymphocyte specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
