Difference between revisions of "TSS:Mm 64382.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000105966.1:58 BC003796:58 ENSMUST00000128986.7:-209 AK031587:-209 ENSMUST00000038946.8:-238 NM_019391:-238 NM_001271508:-238 uc009kne.1:-238 u...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |WP34= | ||
|all_trans=ENSMUST00000105966.1:58 BC003796:58 ENSMUST00000128986.7:-209 AK031587:-209 ENSMUST00000038946.8:-238 NM_019391:-238 NM_001271508:-238 uc009kne.1:-238 uc009knf.2:-238 uc009kng.2:-238 M90316:-238 | |all_trans=ENSMUST00000105966.1:58 BC003796:58 ENSMUST00000128986.7:-209 AK031587:-209 ENSMUST00000038946.8:-238 NM_019391:-238 NM_001271508:-238 uc009kne.1:-238 uc009knf.2:-238 uc009kng.2:-238 M90316:-238 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=244 | |distance_to_tss=244 | ||
|end=142472093 | |end=142472093 | ||
| + | |end_of_center_position=142472087 | ||
|entrez_id=16985 | |entrez_id=16985 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=Lsp-1 | + | |gene_alias=Lsp-1 |
|gene_description=lymphocyte specific 1 | |gene_description=lymphocyte specific 1 | ||
|gene_id=16985 | |gene_id=16985 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Mm.234003 | |nearest_unigene=Mm.234003 | ||
|num_trans=11 | |num_trans=11 | ||
| + | |p50= | ||
| + | |pp52= | ||
|species=mouse | |species=mouse | ||
|start=142472080 | |start=142472080 | ||
| + | |start_of_center_position=142472086 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000105966.1 BC003796 | |transcript_name=ENSMUST00000105966.1 BC003796 | ||
Revision as of 10:14, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 142472086 |
|---|---|
| End of the center position in the TSS region: | 142472087 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000105966.1 BC003796 |
|---|---|
| Distance: | 58 |
| Num_trans: | 11 |
| All_trans: | ENSMUST00000105966.1:58 BC003796:58 ENSMUST00000128986.7:-209 AK031587:-209 ENSMUST00000038946.8:-238 NM_019391:-238 NM_001271508:-238 uc009kne.1:-238 uc009knf.2:-238 uc009kng.2:-238 M90316:-238 |
TATA-Box annotation
| Distance to TSS: | 244 |
|---|---|
| Nearest PromoterID: | NM_019391 |
| Entrez ID: | 16985 |
| Nearest Unigene: | Mm.234003 |
| Nearest Refseq: | NM_019391 |
| Nearest Ensembl: | ENSMUSG00000018819 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | Lsp-1 |
| Gene Description: | lymphocyte specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
