Difference between revisions of "TSS:Mm 64387.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000149521.7:-35 NM_001271523:-35 uc009knh.2:-35 AK075783:-35 |chr=chr7 |cpg_percent=0.03 |distance=-35 |distance_to_tss=39 |end=142477057 |entr...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |WP34= | ||
|all_trans=ENSMUST00000149521.7:-35 NM_001271523:-35 uc009knh.2:-35 AK075783:-35 | |all_trans=ENSMUST00000149521.7:-35 NM_001271523:-35 uc009knh.2:-35 AK075783:-35 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=39 | |distance_to_tss=39 | ||
|end=142477057 | |end=142477057 | ||
| + | |end_of_center_position=142477053 | ||
|entrez_id=16985 | |entrez_id=16985 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=Lsp-1 | + | |gene_alias=Lsp-1 |
|gene_description=lymphocyte specific 1 | |gene_description=lymphocyte specific 1 | ||
|gene_id=16985 | |gene_id=16985 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Mm.234003 | |nearest_unigene=Mm.234003 | ||
|num_trans=4 | |num_trans=4 | ||
| + | |p50= | ||
| + | |pp52= | ||
|species=mouse | |species=mouse | ||
|start=142477047 | |start=142477047 | ||
| + | |start_of_center_position=142477052 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000149521.7 NM_001271523 uc009knh.2 AK075783 | |transcript_name=ENSMUST00000149521.7 NM_001271523 uc009knh.2 AK075783 | ||
Revision as of 10:14, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 142477052 |
|---|---|
| End of the center position in the TSS region: | 142477053 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000149521.7 NM_001271523 uc009knh.2 AK075783 |
|---|---|
| Distance: | -35 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000149521.7:-35 NM_001271523:-35 uc009knh.2:-35 AK075783:-35 |
TATA-Box annotation
| Distance to TSS: | 39 |
|---|---|
| Nearest PromoterID: | NM_001271523 |
| Entrez ID: | 16985 |
| Nearest Unigene: | Mm.234003 |
| Nearest Refseq: | NM_019391 |
| Nearest Ensembl: | ENSMUSG00000018819 |
| Gene Name: | lymphocyte specific 1 |
| Gene Alias: | Lsp-1 |
| Gene Description: | lymphocyte specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
