Difference between revisions of "TSS:Hg 46503.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000474251.5:15 ENST00000487902.5:15 uc062uen.1:15 uc062ueo.1:15 ENST00000476034.5:303 uc062uep.1:303 AK308789:303 ENST00000465426.5:-380 uc062uem....") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CSNBAD2= | ||
| + | |PDEB= | ||
| + | |RP40= | ||
|all_trans=ENST00000474251.5:15 ENST00000487902.5:15 uc062uen.1:15 uc062ueo.1:15 ENST00000476034.5:303 uc062uep.1:303 AK308789:303 ENST00000465426.5:-380 uc062uem.1:-380 | |all_trans=ENST00000474251.5:15 ENST00000487902.5:15 uc062uen.1:15 uc062ueo.1:15 ENST00000476034.5:303 uc062uep.1:303 AK308789:303 ENST00000465426.5:-380 uc062uem.1:-380 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-1223 | |distance_to_tss=-1223 | ||
|end=651970 | |end=651970 | ||
| + | |end_of_center_position=651955 | ||
|entrez_id=5158 | |entrez_id=5158 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=CSNB3 | + | |gene_alias=CSNB3 |
|gene_description=phosphodiesterase 6B | |gene_description=phosphodiesterase 6B | ||
|gene_id=5158 | |gene_id=5158 | ||
| Line 22: | Line 26: | ||
|nearest_unigene=Hs.623810 | |nearest_unigene=Hs.623810 | ||
|num_trans=9 | |num_trans=9 | ||
| + | |rd1= | ||
|species=human | |species=human | ||
|start=651938 | |start=651938 | ||
| + | |start_of_center_position=651954 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000474251.5 ENST00000487902.5 uc062uen.1 uc062ueo.1 | |transcript_name=ENST00000474251.5 ENST00000487902.5 uc062uen.1 uc062ueo.1 | ||
Revision as of 14:19, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 651954 |
|---|---|
| End of the center position in the TSS region: | 651955 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000474251.5 ENST00000487902.5 uc062uen.1 uc062ueo.1 |
|---|---|
| Distance: | 15 |
| Num_trans: | 9 |
| All_trans: | ENST00000474251.5:15 ENST00000487902.5:15 uc062uen.1:15 uc062ueo.1:15 ENST00000476034.5:303 uc062uep.1:303 AK308789:303 ENST00000465426.5:-380 uc062uem.1:-380 |
TATA-Box annotation
| Distance to TSS: | -1223 |
|---|---|
| Nearest PromoterID: | NM_001145292 |
| Entrez ID: | 5158 |
| Nearest Unigene: | Hs.623810 |
| Nearest Refseq: | NM_000283 |
| Nearest Ensembl: | ENSG00000133256 |
| Gene Name: | phosphodiesterase 6B |
| Gene Alias: | CSNB3 |
| Gene Description: | phosphodiesterase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
