Difference between revisions of "TSS:Hg 46506.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000460119.1:0 uc062uew.1:0 ENST00000471824.6:40 uc062uex.1:40 |chr=chr4 |cpg_percent=0.09 |distance=0 |distance_to_tss=10536 |end=663730 |entrez_i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CSNBAD2= | ||
| + | |PDEB= | ||
| + | |RP40= | ||
|all_trans=ENST00000460119.1:0 uc062uew.1:0 ENST00000471824.6:40 uc062uex.1:40 | |all_trans=ENST00000460119.1:0 uc062uew.1:0 ENST00000471824.6:40 uc062uex.1:40 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=10536 | |distance_to_tss=10536 | ||
|end=663730 | |end=663730 | ||
| + | |end_of_center_position=663714 | ||
|entrez_id=5158 | |entrez_id=5158 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| − | |gene_alias=CSNB3 | + | |gene_alias=CSNB3 |
|gene_description=phosphodiesterase 6B | |gene_description=phosphodiesterase 6B | ||
|gene_id=5158 | |gene_id=5158 | ||
| Line 22: | Line 26: | ||
|nearest_unigene=Hs.623810 | |nearest_unigene=Hs.623810 | ||
|num_trans=4 | |num_trans=4 | ||
| + | |rd1= | ||
|species=human | |species=human | ||
|start=663696 | |start=663696 | ||
| + | |start_of_center_position=663713 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000460119.1 uc062uew.1 | |transcript_name=ENST00000460119.1 uc062uew.1 | ||
Revision as of 14:19, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 663713 |
|---|---|
| End of the center position in the TSS region: | 663714 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000460119.1 uc062uew.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000460119.1:0 uc062uew.1:0 ENST00000471824.6:40 uc062uex.1:40 |
TATA-Box annotation
| Distance to TSS: | 10536 |
|---|---|
| Nearest PromoterID: | NM_001145292 |
| Entrez ID: | 5158 |
| Nearest Unigene: | Hs.623810 |
| Nearest Refseq: | NM_000283 |
| Nearest Ensembl: | ENSG00000133256 |
| Gene Name: | phosphodiesterase 6B |
| Gene Alias: | CSNB3 |
| Gene Description: | phosphodiesterase 6B |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
