Difference between revisions of "TSS:Hg 52013.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000507460.1:-71 uc010igd.2:-71 AK307128:-71 ENST00000506961.5:75 uc062wit.1:75 ENST00000514090.5:76 uc062wik.1:76 ENST00000356504.5:78 NM_00111417...") |
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|distance_to_tss=82 | |distance_to_tss=82 | ||
|end=46389479 | |end=46389479 | ||
| + | |end_of_center_position=46389468 | ||
|entrez_id=2555 | |entrez_id=2555 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
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|species=human | |species=human | ||
|start=46389456 | |start=46389456 | ||
| + | |start_of_center_position=46389467 | ||
|strand=- | |strand=- | ||
|tata_box="-28(TCTTTTATAGTC,+,0.00)" | |tata_box="-28(TCTTTTATAGTC,+,0.00)" | ||
Revision as of 16:58, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 46389467 |
|---|---|
| End of the center position in the TSS region: | 46389468 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000507460.1 uc010igd.2 AK307128 |
|---|---|
| Distance: | -71 |
| Num_trans: | 23 |
| All_trans: | ENST00000507460.1:-71 uc010igd.2:-71 AK307128:-71 ENST00000506961.5:75 uc062wit.1:75 ENST00000514090.5:76 uc062wik.1:76 ENST00000356504.5:78 NM_001114175:78 uc003gxc.5:78 AK125179:78 ENST00000503806.5:94 uc062wis.1:94 AB209295:-276 ENST00000630416.2:-309 ENST00000514193.5:-309 uc062wil.1:-309 uc062wir.1:-309 AK293466:-309 AK289662:420 ENST00000381620.8:-449 uc010igc.4:-449 S62907:-449 |
TATA-Box annotation
| Distance to TSS: | 82 |
|---|---|
| Nearest PromoterID: | NM_001330690 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-28(TCTTTTATAGTC,+,0.00)" |
