Difference between revisions of "TSS:Hg 52018.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000540012.5:20 NM_000807:20 NM_001286827:20 uc062wim.1:20 ENST00000381620.8:131 uc010igc.4:131 S62907:131 ENST00000630416.2:271 ENST00000514193.5:...") |
|||
| Line 6: | Line 6: | ||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=46390073 | |end=46390073 | ||
| + | |end_of_center_position=46390066 | ||
|entrez_id=2555 | |entrez_id=2555 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=46390058 | |start=46390058 | ||
| + | |start_of_center_position=46390065 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000540012.5 NM_000807 NM_001286827 uc062wim.1 | |transcript_name=ENST00000540012.5 NM_000807 NM_001286827 uc062wim.1 | ||
Revision as of 16:58, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 46390065 |
|---|---|
| End of the center position in the TSS region: | 46390066 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000540012.5 NM_000807 NM_001286827 uc062wim.1 |
|---|---|
| Distance: | 20 |
| Num_trans: | 16 |
| All_trans: | ENST00000540012.5:20 NM_000807:20 NM_001286827:20 uc062wim.1:20 ENST00000381620.8:131 uc010igc.4:131 S62907:131 ENST00000630416.2:271 ENST00000514193.5:271 uc062wil.1:271 uc062wir.1:271 AK293466:271 AB209295:304 ENST00000515082.5:-331 uc003gxe.3:-331 BC022488:-331 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001286827 |
| Entrez ID: | 2555 |
| Nearest Unigene: | Hs.48372 |
| Nearest Refseq: | NM_000807 |
| Nearest Ensembl: | ENSG00000151834 |
| Gene Name: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Alias: | - |
| Gene Description: | gamma-aminobutyric acid type A receptor alpha2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
