Difference between revisions of "TSS:Hg 134743.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000400445.7:0 ENST00000310336.8:0 ENST00000629018.2:0 NM_015678:0 uc058wka.1:0 uc058wkb.1:0 uc058wkc.1:0 AF467288:0 ENST00000379939.6:301 uc021ric...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LYST2= | ||
|all_trans=ENST00000400445.7:0 ENST00000310336.8:0 ENST00000629018.2:0 NM_015678:0 uc058wka.1:0 uc058wkb.1:0 uc058wkc.1:0 AF467288:0 ENST00000379939.6:301 uc021ric.2:301 BC172597:462 | |all_trans=ENST00000400445.7:0 ENST00000310336.8:0 ENST00000629018.2:0 NM_015678:0 uc058wka.1:0 uc058wkb.1:0 uc058wkc.1:0 AF467288:0 ENST00000379939.6:301 uc021ric.2:301 BC172597:462 | ||
|chr=chr13 | |chr=chr13 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=19 | |distance_to_tss=19 | ||
|end=34942359 | |end=34942359 | ||
| + | |end_of_center_position=34942307 | ||
|entrez_id=26960 | |entrez_id=26960 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=BCL8B | + | |gene_alias=BCL8B |
|gene_description=neurobeachin | |gene_description=neurobeachin | ||
|gene_id=26960 | |gene_id=26960 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=34942253 | |start=34942253 | ||
| + | |start_of_center_position=34942306 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000400445.7 ENST00000310336.8 ENST00000629018.2 NM_015678 uc058wka.1 uc058wkb.1 uc058wkc.1 AF467288 | |transcript_name=ENST00000400445.7 ENST00000310336.8 ENST00000629018.2 NM_015678 uc058wka.1 uc058wkb.1 uc058wkc.1 AF467288 | ||
Revision as of 17:35, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 34942306 |
|---|---|
| End of the center position in the TSS region: | 34942307 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000400445.7 ENST00000310336.8 ENST00000629018.2 NM_015678 uc058wka.1 uc058wkb.1 uc058wkc.1 AF467288 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000400445.7:0 ENST00000310336.8:0 ENST00000629018.2:0 NM_015678:0 uc058wka.1:0 uc058wkb.1:0 uc058wkc.1:0 AF467288:0 ENST00000379939.6:301 uc021ric.2:301 BC172597:462 |
TATA-Box annotation
| Distance to TSS: | 19 |
|---|---|
| Nearest PromoterID: | NM_015678 |
| Entrez ID: | 26960 |
| Nearest Unigene: | Hs.491172 |
| Nearest Refseq: | NM_015678 |
| Nearest Ensembl: | ENSG00000172915 |
| Gene Name: | neurobeachin |
| Gene Alias: | BCL8B |
| Gene Description: | neurobeachin |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
