Personal tools

Difference between revisions of "TSS:Hg 134767.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |all_trans=ENST00000630422.2:0 uc010teo.3:0 AK316392:0 NM_001111046:306 NM_001111047:306 ENST00000440264.5:379 uc010abp.4:379 AK301897:413 |chr=chr13 |cpg_percent=...")
 
Line 6: Line 6:
 
|distance_to_tss=-313
 
|distance_to_tss=-313
 
|end=36431524
 
|end=36431524
 +
|end_of_center_position=36431518
 
|entrez_id=8900
 
|entrez_id=8900
 
|gc_percent=0.711443
 
|gc_percent=0.711443
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=36431510
 
|start=36431510
 +
|start_of_center_position=36431517
 
|strand=+
 
|strand=+
 
|transcript_name=ENST00000630422.2 uc010teo.3 AK316392
 
|transcript_name=ENST00000630422.2 uc010teo.3 AK316392

Revision as of 17:41, 13 May 2019

Basic information about the TSS


TSS ID:hg_134767.1
Species:human
Chr:chr13
TSS Classification:yes
Start:36431510
End:36431524
Strand:+
TSS Score:1
Start of the center position in the TSS region:36431517
End of the center position in the TSS region:36431518



Gene and protein annotation


Transcript_name:ENST00000630422.2 uc010teo.3 AK316392
Distance:0
GeneID:8900
HGNC/MGI_ID:HGNC:1577
UniProt_ID:P78396
Gene_name:cyclin A1
Gene_symbol:CCNA1
Gene_synonyms:CT146
Gene_source:HGNC:1577



Transcript annotation


Transcript_name:ENST00000630422.2 uc010teo.3 AK316392
Distance:0
Num_trans:8
All_trans:ENST00000630422.2:0 uc010teo.3:0 AK316392:0 NM_001111046:306 NM_001111047:306 ENST00000440264.5:379 uc010abp.4:379 AK301897:413



TATA-Box annotation


Distance to TSS:-313
Nearest PromoterID:NM_001111047
Entrez ID:8900
Nearest Unigene:Hs.417050
Nearest Refseq:NM_003914
Nearest Ensembl:ENSG00000133101
Gene Name:cyclin A1
Gene Alias:CT146
Gene Description:cyclin A1
Gene Type:protein-coding
CpG%:0.105
GC%:0.711443
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):