Difference between revisions of "TSS:Mm 129743.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK172406:0 AF373847:12 AF350257:17 ENSMUST00000109535.2:26 uc007wyl.1:26 AK156387:26 ENSMUST00000089161.8:29 NM_028075:29 uc007wyj.1:29 uc007wyk.1:29 AK...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |BAFF-R= | ||
| + | |Baffr= | ||
| + | |Bcmd= | ||
| + | |Bcmd-1= | ||
| + | |Bcmd1= | ||
| + | |Lvis22= | ||
|all_trans=AK172406:0 AF373847:12 AF350257:17 ENSMUST00000109535.2:26 uc007wyl.1:26 AK156387:26 ENSMUST00000089161.8:29 NM_028075:29 uc007wyj.1:29 uc007wyk.1:29 AK008142:31 BC104126:36 BC104127:36 DQ294928:53 DQ294929:53 | |all_trans=AK172406:0 AF373847:12 AF350257:17 ENSMUST00000109535.2:26 uc007wyl.1:26 AK156387:26 ENSMUST00000089161.8:29 NM_028075:29 uc007wyj.1:29 uc007wyk.1:29 AK008142:31 BC104126:36 BC104127:36 DQ294928:53 DQ294929:53 | ||
|chr=chr15 | |chr=chr15 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=-36 | |distance_to_tss=-36 | ||
|end=82224379 | |end=82224379 | ||
| + | |end_of_center_position=82224372 | ||
|entrez_id=72049 | |entrez_id=72049 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
| − | |gene_alias=2010006P15Rik | + | |gene_alias=2010006P15Rik |
|gene_description="tumor necrosis factor receptor superfamily, member 13c" | |gene_description="tumor necrosis factor receptor superfamily, member 13c" | ||
|gene_id=72049 | |gene_id=72049 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=82224364 | |start=82224364 | ||
| + | |start_of_center_position=82224371 | ||
|strand=- | |strand=- | ||
|transcript_name=AK172406 | |transcript_name=AK172406 | ||
Revision as of 18:27, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 82224371 |
|---|---|
| End of the center position in the TSS region: | 82224372 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK172406 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | AK172406:0 AF373847:12 AF350257:17 ENSMUST00000109535.2:26 uc007wyl.1:26 AK156387:26 ENSMUST00000089161.8:29 NM_028075:29 uc007wyj.1:29 uc007wyk.1:29 AK008142:31 BC104126:36 BC104127:36 DQ294928:53 DQ294929:53 |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NM_028075 |
| Entrez ID: | 72049 |
| Nearest Unigene: | Mm.240047 |
| Nearest Refseq: | NM_028075 |
| Nearest Ensembl: | ENSMUSG00000068105 |
| Gene Name: | "tumor necrosis factor receptor superfamily, member 13c" |
| Gene Alias: | 2010006P15Rik |
| Gene Description: | "tumor necrosis factor receptor superfamily, member 13c" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
