Difference between revisions of "TSS:Hg 138419.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000429687.7:419 uc001vxd.4:419 NM_005484:451 NM_001042618:451 ENST00000250416.9:452 uc001vxc.4:452 ENST00000529465.6:465 uc058yrx.1:465 AK300971:4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |RPPH1-1= | ||
|all_trans=ENST00000429687.7:419 uc001vxd.4:419 NM_005484:451 NM_001042618:451 ENST00000250416.9:452 uc001vxc.4:452 ENST00000529465.6:465 uc058yrx.1:465 AK300971:472 AK290079:472 ENST00000527915.5:474 uc001vxb.2:474 AK001980:474 BC172288:477 AJ236912:477 AF085734:481 | |all_trans=ENST00000429687.7:419 uc001vxd.4:419 NM_005484:451 NM_001042618:451 ENST00000250416.9:452 uc001vxc.4:452 ENST00000529465.6:465 uc058yrx.1:465 AK300971:472 AK290079:472 ENST00000527915.5:474 uc001vxb.2:474 AK001980:474 BC172288:477 AJ236912:477 AF085734:481 | ||
|chr=chr14 | |chr=chr14 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=275 | |distance_to_tss=275 | ||
|end=20343163 | |end=20343163 | ||
| + | |end_of_center_position=20343136 | ||
|entrez_id=85495 | |entrez_id=85495 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=H1RNA | + | |gene_alias=H1RNA |
|gene_description=ribonuclease P RNA component H1 | |gene_description=ribonuclease P RNA component H1 | ||
|gene_id=10038 | |gene_id=10038 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=20343108 | |start=20343108 | ||
| + | |start_of_center_position=20343135 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000429687.7 uc001vxd.4 | |transcript_name=ENST00000429687.7 uc001vxd.4 | ||
Revision as of 21:54, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 20343135 |
|---|---|
| End of the center position in the TSS region: | 20343136 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000429687.7 uc001vxd.4 |
|---|---|
| Distance: | 419 |
| Num_trans: | 16 |
| All_trans: | ENST00000429687.7:419 uc001vxd.4:419 NM_005484:451 NM_001042618:451 ENST00000250416.9:452 uc001vxc.4:452 ENST00000529465.6:465 uc058yrx.1:465 AK300971:472 AK290079:472 ENST00000527915.5:474 uc001vxb.2:474 AK001980:474 BC172288:477 AJ236912:477 AF085734:481 |
TATA-Box annotation
| Distance to TSS: | 275 |
|---|---|
| Nearest PromoterID: | NR_002312 |
| Entrez ID: | 85495 |
| Nearest Unigene: | Hs.613102 |
| Nearest Refseq: | NR_002312 |
| Nearest Ensembl: | ENSG00000277209 |
| Gene Name: | poly(ADP-ribose) polymerase 2 |
| Gene Alias: | H1RNA |
| Gene Description: | ribonuclease P RNA component H1 |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
