Difference between revisions of "TSS:Mm 78333.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK220447:-245 AK088997:-258 AK144127:-258 AK147986:-262 AK141572:-263 BC058587:-276 ENSMUST00000115272.8:-472 ENSMUST00000165594.2:-472 NM_009859:-472 N...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |E430034N22= | ||
|all_trans=AK220447:-245 AK088997:-258 AK144127:-258 AK147986:-262 AK141572:-263 BC058587:-276 ENSMUST00000115272.8:-472 ENSMUST00000165594.2:-472 NM_009859:-472 NM_001205367:-472 uc033jjp.1:-472 uc033jjq.1:-472 | |all_trans=AK220447:-245 AK088997:-258 AK144127:-258 AK147986:-262 AK141572:-263 BC058587:-276 ENSMUST00000115272.8:-472 ENSMUST00000165594.2:-472 NM_009859:-472 NM_001205367:-472 uc033jjp.1:-472 uc033jjq.1:-472 | ||
|chr=chr9 | |chr=chr9 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=481 | |distance_to_tss=481 | ||
|end=25252930 | |end=25252930 | ||
| + | |end_of_center_position=25252921 | ||
|entrez_id=235072 | |entrez_id=235072 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
| − | |gene_alias=Cdc10 | + | |gene_alias=Cdc10 |
|gene_description=septin 7 | |gene_description=septin 7 | ||
|gene_id=235072 | |gene_id=235072 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=25252910 | |start=25252910 | ||
| + | |start_of_center_position=25252920 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK220447 | |transcript_name=AK220447 | ||
Revision as of 22:01, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 25252920 |
|---|---|
| End of the center position in the TSS region: | 25252921 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK220447 |
|---|---|
| Distance: | -245 |
| Num_trans: | 12 |
| All_trans: | AK220447:-245 AK088997:-258 AK144127:-258 AK147986:-262 AK141572:-263 BC058587:-276 ENSMUST00000115272.8:-472 ENSMUST00000165594.2:-472 NM_009859:-472 NM_001205367:-472 uc033jjp.1:-472 uc033jjq.1:-472 |
TATA-Box annotation
| Distance to TSS: | 481 |
|---|---|
| Nearest PromoterID: | NM_001205367 |
| Entrez ID: | 235072 |
| Nearest Unigene: | Mm.270259 |
| Nearest Refseq: | NM_009859 |
| Nearest Ensembl: | ENSMUSG00000001833 |
| Gene Name: | septin 7 |
| Gene Alias: | Cdc10 |
| Gene Description: | septin 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
