Difference between revisions of "TSS:Mm 135311.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_020260:34 uc007zfg.1:34 uc007zfh.1:34 ENSMUST00000124866.1:170 AK018057:170 ENSMUST00000132697.1:171 AK045213:171 AK136348:-172 ENSMUST00000023487.4:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU041750= | ||
| + | |Cdgap= | ||
| + | |D330026I07Rik= | ||
|all_trans=NM_020260:34 uc007zfg.1:34 uc007zfh.1:34 ENSMUST00000124866.1:170 AK018057:170 ENSMUST00000132697.1:171 AK045213:171 AK136348:-172 ENSMUST00000023487.4:-191 AK138417:-191 AK149975:199 AK150109:199 AK155729:214 AK170685:216 BC138870:229 AF151363:393 | |all_trans=NM_020260:34 uc007zfg.1:34 uc007zfh.1:34 ENSMUST00000124866.1:170 AK018057:170 ENSMUST00000132697.1:171 AK045213:171 AK136348:-172 ENSMUST00000023487.4:-191 AK138417:-191 AK149975:199 AK150109:199 AK155729:214 AK170685:216 BC138870:229 AF151363:393 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-41 | |distance_to_tss=-41 | ||
|end=38713083 | |end=38713083 | ||
| + | |end_of_center_position=38713076 | ||
|entrez_id=12549 | |entrez_id=12549 | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
| − | |gene_alias=5830477L08Rik | + | |gene_alias=5830477L08Rik |
|gene_description=Rho GTPase activating protein 31 | |gene_description=Rho GTPase activating protein 31 | ||
|gene_id=12549 | |gene_id=12549 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=38713068 | |start=38713068 | ||
| + | |start_of_center_position=38713075 | ||
|strand=- | |strand=- | ||
|transcript_name=NM_020260 uc007zfg.1 uc007zfh.1 | |transcript_name=NM_020260 uc007zfg.1 uc007zfh.1 | ||
Revision as of 01:33, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 38713075 |
|---|---|
| End of the center position in the TSS region: | 38713076 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_020260 uc007zfg.1 uc007zfh.1 |
|---|---|
| Distance: | 34 |
| Num_trans: | 16 |
| All_trans: | NM_020260:34 uc007zfg.1:34 uc007zfh.1:34 ENSMUST00000124866.1:170 AK018057:170 ENSMUST00000132697.1:171 AK045213:171 AK136348:-172 ENSMUST00000023487.4:-191 AK138417:-191 AK149975:199 AK150109:199 AK155729:214 AK170685:216 BC138870:229 AF151363:393 |
TATA-Box annotation
| Distance to TSS: | -41 |
|---|---|
| Nearest PromoterID: | NM_020260 |
| Entrez ID: | 12549 |
| Nearest Unigene: | Mm.370848 |
| Nearest Refseq: | NM_020260 |
| Nearest Ensembl: | ENSMUSG00000022799 |
| Gene Name: | Rho GTPase activating protein 31 |
| Gene Alias: | 5830477L08Rik |
| Gene Description: | Rho GTPase activating protein 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
