Difference between revisions of "TSS:Mm 135316.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000023487.4:118 AK138417:118 AK136348:137 NM_020260:357 uc007zfg.1:357 uc007zfh.1:357 ENSMUST00000124866.1:493 AK018057:493 ENSMUST00000132697....") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU041750= | ||
| + | |Cdgap= | ||
| + | |D330026I07Rik= | ||
|all_trans=ENSMUST00000023487.4:118 AK138417:118 AK136348:137 NM_020260:357 uc007zfg.1:357 uc007zfh.1:357 ENSMUST00000124866.1:493 AK018057:493 ENSMUST00000132697.1:494 AK045213:494 | |all_trans=ENSMUST00000023487.4:118 AK138417:118 AK136348:137 NM_020260:357 uc007zfg.1:357 uc007zfh.1:357 ENSMUST00000124866.1:493 AK018057:493 ENSMUST00000132697.1:494 AK045213:494 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=-364 | |distance_to_tss=-364 | ||
|end=38713407 | |end=38713407 | ||
| + | |end_of_center_position=38713400 | ||
|entrez_id=12549 | |entrez_id=12549 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=5830477L08Rik | + | |gene_alias=5830477L08Rik |
|gene_description=Rho GTPase activating protein 31 | |gene_description=Rho GTPase activating protein 31 | ||
|gene_id=12549 | |gene_id=12549 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=38713391 | |start=38713391 | ||
| + | |start_of_center_position=38713399 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000023487.4 AK138417 | |transcript_name=ENSMUST00000023487.4 AK138417 | ||
Revision as of 01:33, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 38713399 |
|---|---|
| End of the center position in the TSS region: | 38713400 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000023487.4 AK138417 |
|---|---|
| Distance: | 118 |
| Num_trans: | 10 |
| All_trans: | ENSMUST00000023487.4:118 AK138417:118 AK136348:137 NM_020260:357 uc007zfg.1:357 uc007zfh.1:357 ENSMUST00000124866.1:493 AK018057:493 ENSMUST00000132697.1:494 AK045213:494 |
TATA-Box annotation
| Distance to TSS: | -364 |
|---|---|
| Nearest PromoterID: | NM_020260 |
| Entrez ID: | 12549 |
| Nearest Unigene: | Mm.370848 |
| Nearest Refseq: | NM_020260 |
| Nearest Ensembl: | ENSMUSG00000022799 |
| Gene Name: | Rho GTPase activating protein 31 |
| Gene Alias: | 5830477L08Rik |
| Gene Description: | Rho GTPase activating protein 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
