Difference between revisions of "TSS:Hg 140410.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC047950:0 AB464295:138 BC160145:138 ENST00000256367.2:-176 NM_015351:-176 uc001xmi.2:-176 D86980:-176 |chr=chr14 |cpg_percent=0.175 |distance=0 |distan...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=190 | |distance_to_tss=190 | ||
|end=70641992 | |end=70641992 | ||
| + | |end_of_center_position=70641978 | ||
|entrez_id=23508 | |entrez_id=23508 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=70641962 | |start=70641962 | ||
| + | |start_of_center_position=70641977 | ||
|strand=+ | |strand=+ | ||
|tata_box="71(GCTTTTAAACCC,+,0.00)" | |tata_box="71(GCTTTTAAACCC,+,0.00)" | ||
Revision as of 03:02, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 70641977 |
|---|---|
| End of the center position in the TSS region: | 70641978 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC047950 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BC047950:0 AB464295:138 BC160145:138 ENST00000256367.2:-176 NM_015351:-176 uc001xmi.2:-176 D86980:-176 |
TATA-Box annotation
| Distance to TSS: | 190 |
|---|---|
| Nearest PromoterID: | NM_015351 |
| Entrez ID: | 23508 |
| Nearest Unigene: | Hs.79170 |
| Nearest Refseq: | NM_015351 |
| Nearest Ensembl: | ENSG00000133985 |
| Gene Name: | tetratricopeptide repeat domain 9 |
| Gene Alias: | TTC9A |
| Gene Description: | tetratricopeptide repeat domain 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "71(GCTTTTAAACCC,+,0.00)" |
