Difference between revisions of "TSS:Hg 140860.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000541158.6:-42 uc059dxz.1:-42 ENST00000557096.1:-96 uc059dxy.1:-96 AK303378:278 ENST00000342443.10:344 uc001xvc.4:344 BC024205:344 ENST0000029817...") |
|||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
+ | |LGR3= | ||
|all_trans=ENST00000541158.6:-42 uc059dxz.1:-42 ENST00000557096.1:-96 uc059dxy.1:-96 AK303378:278 ENST00000342443.10:344 uc001xvc.4:344 BC024205:344 ENST00000298171.6:438 NM_000369:438 NM_001142626:438 NM_001018036:438 uc001xvd.1:438 ENST00000553763.1:494 uc059dya.1:494 M31774:495 | |all_trans=ENST00000541158.6:-42 uc059dxz.1:-42 ENST00000557096.1:-96 uc059dxy.1:-96 AK303378:278 ENST00000342443.10:344 uc001xvc.4:344 BC024205:344 ENST00000298171.6:438 NM_000369:438 NM_001142626:438 NM_001018036:438 uc001xvd.1:438 ENST00000553763.1:494 uc059dya.1:494 M31774:495 | ||
|chr=chr14 | |chr=chr14 | ||
Line 6: | Line 7: | ||
|distance_to_tss=-439 | |distance_to_tss=-439 | ||
|end=80955087 | |end=80955087 | ||
+ | |end_of_center_position=80955086 | ||
|entrez_id=7253 | |entrez_id=7253 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
− | |gene_alias=CHNG1 | + | |gene_alias=CHNG1 |
|gene_description=thyroid stimulating hormone receptor | |gene_description=thyroid stimulating hormone receptor | ||
|gene_id=7253 | |gene_id=7253 | ||
Line 16: | Line 18: | ||
|gene_synonyms=LGR3 | |gene_synonyms=LGR3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hTSHR-I= | ||
|hgnc_mgi_id=HGNC:12373 | |hgnc_mgi_id=HGNC:12373 | ||
|nearest_ensembl=ENSG00000165409 | |nearest_ensembl=ENSG00000165409 | ||
Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=80955084 | |start=80955084 | ||
+ | |start_of_center_position=80955085 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000541158.6 uc059dxz.1 | |transcript_name=ENST00000541158.6 uc059dxz.1 |
Revision as of 04:08, 14 May 2019
Basic information about the TSS
|
|
Start of the center position in the TSS region: | 80955085 |
---|---|
End of the center position in the TSS region: | 80955086 |
Gene and protein annotation
|
|
Transcript annotation
Transcript_name: | ENST00000541158.6 uc059dxz.1 |
---|---|
Distance: | -42 |
Num_trans: | 16 |
All_trans: | ENST00000541158.6:-42 uc059dxz.1:-42 ENST00000557096.1:-96 uc059dxy.1:-96 AK303378:278 ENST00000342443.10:344 uc001xvc.4:344 BC024205:344 ENST00000298171.6:438 NM_000369:438 NM_001142626:438 NM_001018036:438 uc001xvd.1:438 ENST00000553763.1:494 uc059dya.1:494 M31774:495 |
TATA-Box annotation
Distance to TSS: | -439 |
---|---|
Nearest PromoterID: | NM_001018036 |
Entrez ID: | 7253 |
Nearest Unigene: | Hs.160411 |
Nearest Refseq: | NM_000369 |
Nearest Ensembl: | ENSG00000165409 |
Gene Name: | thyroid stimulating hormone receptor |
Gene Alias: | CHNG1 |
Gene Description: | thyroid stimulating hormone receptor |
Gene Type: | protein-coding |
CpG%: | 0.075 |
GC%: | 0.671642 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |