Difference between revisions of "TSS:Hg 141886.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_001243127:0 BC131591:17 ENST00000430725.6:-201 uc001yqs.4:-201 |chr=chr14 |cpg_percent=0.18 |distance=0 |distance_to_tss=-21 |end=105300816 |entrez_i...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PACS1L= | ||
|all_trans=NM_001243127:0 BC131591:17 ENST00000430725.6:-201 uc001yqs.4:-201 | |all_trans=NM_001243127:0 BC131591:17 ENST00000430725.6:-201 uc001yqs.4:-201 | ||
|chr=chr14 | |chr=chr14 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-21 | |distance_to_tss=-21 | ||
|end=105300816 | |end=105300816 | ||
| + | |end_of_center_position=105300790 | ||
|entrez_id=23241 | |entrez_id=23241 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| − | |gene_alias=PACS-2 | + | |gene_alias=PACS-2 |
|gene_description=phosphofurin acidic cluster sorting protein 2 | |gene_description=phosphofurin acidic cluster sorting protein 2 | ||
|gene_id=23241 | |gene_id=23241 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=105300763 | |start=105300763 | ||
| + | |start_of_center_position=105300789 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_001243127 | |transcript_name=NM_001243127 | ||
Revision as of 06:42, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 105300789 |
|---|---|
| End of the center position in the TSS region: | 105300790 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001243127 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_001243127:0 BC131591:17 ENST00000430725.6:-201 uc001yqs.4:-201 |
TATA-Box annotation
| Distance to TSS: | -21 |
|---|---|
| Nearest PromoterID: | NM_001243127 |
| Entrez ID: | 23241 |
| Nearest Unigene: | Hs.525626 |
| Nearest Refseq: | NM_015197 |
| Nearest Ensembl: | ENSG00000179364 |
| Gene Name: | phosphofurin acidic cluster sorting protein 2 |
| Gene Alias: | PACS-2 |
| Gene Description: | phosphofurin acidic cluster sorting protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
