Difference between revisions of "TSS:Hg 59962.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000523372.1:0 uc063jhv.1:0 KJ896852:0 KR712069:0 KR712070:0 KR712071:0 AK315200:-1 AK299640:22 BC074795:-23 BC069348:-84 ENST00000522990.5:-117 uc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ECA2= | ||
| + | |GEFSP3= | ||
|all_trans=ENST00000523372.1:0 uc063jhv.1:0 KJ896852:0 KR712069:0 KR712070:0 KR712071:0 AK315200:-1 AK299640:22 BC074795:-23 BC069348:-84 ENST00000522990.5:-117 uc063jhu.1:-117 BC059389:-168 ENST00000361925.8:-211 uc003lyz.5:-211 X15376:-211 ENST00000414552.6:-216 uc010jjc.4:-216 BC036030:-216 BC052926:-280 NM_198903:-349 NM_000816:-349 NM_198904:-349 ENST00000356592.7:-451 uc003lyy.5:-451 | |all_trans=ENST00000523372.1:0 uc063jhv.1:0 KJ896852:0 KR712069:0 KR712070:0 KR712071:0 AK315200:-1 AK299640:22 BC074795:-23 BC069348:-84 ENST00000522990.5:-117 uc063jhu.1:-117 BC059389:-168 ENST00000361925.8:-211 uc003lyz.5:-211 X15376:-211 ENST00000414552.6:-216 uc010jjc.4:-216 BC036030:-216 BC052926:-280 NM_198903:-349 NM_000816:-349 NM_198904:-349 ENST00000356592.7:-451 uc003lyy.5:-451 | ||
|chr=chr5 | |chr=chr5 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=361 | |distance_to_tss=361 | ||
|end=162068016 | |end=162068016 | ||
| + | |end_of_center_position=162068004 | ||
|entrez_id=2566 | |entrez_id=2566 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=CAE2 | + | |gene_alias=CAE2 |
|gene_description=gamma-aminobutyric acid type A receptor gamma2 subunit | |gene_description=gamma-aminobutyric acid type A receptor gamma2 subunit | ||
|gene_id=2566 | |gene_id=2566 | ||
| Line 24: | Line 27: | ||
|species=human | |species=human | ||
|start=162067990 | |start=162067990 | ||
| + | |start_of_center_position=162068003 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000523372.1 uc063jhv.1 KJ896852 KR712069 KR712070 KR712071 | |transcript_name=ENST00000523372.1 uc063jhv.1 KJ896852 KR712069 KR712070 KR712071 | ||
Revision as of 13:09, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 162068003 |
|---|---|
| End of the center position in the TSS region: | 162068004 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000523372.1 uc063jhv.1 KJ896852 KR712069 KR712070 KR712071 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000523372.1:0 uc063jhv.1:0 KJ896852:0 KR712069:0 KR712070:0 KR712071:0 AK315200:-1 AK299640:22 BC074795:-23 BC069348:-84 ENST00000522990.5:-117 uc063jhu.1:-117 BC059389:-168 ENST00000361925.8:-211 uc003lyz.5:-211 X15376:-211 ENST00000414552.6:-216 uc010jjc.4:-216 BC036030:-216 BC052926:-280 NM_198903:-349 NM_000816:-349 NM_198904:-349 ENST00000356592.7:-451 uc003lyy.5:-451 |
TATA-Box annotation
| Distance to TSS: | 361 |
|---|---|
| Nearest PromoterID: | NM_198904 |
| Entrez ID: | 2566 |
| Nearest Unigene: | Hs.7195 |
| Nearest Refseq: | NM_000816 |
| Nearest Ensembl: | ENSG00000113327 |
| Gene Name: | gamma-aminobutyric acid type A receptor gamma2 subunit |
| Gene Alias: | CAE2 |
| Gene Description: | gamma-aminobutyric acid type A receptor gamma2 subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
