Basic information about the TSS
| TSS ID: | hg_238263.1 |
|---|
| Species: | human |
|---|
| Chr: | chr21 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 26170732 |
|---|
| End: | 26170734 |
|---|
| Strand: | - |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 26170733 |
|---|
| End of the center position in the TSS region: | 26170734 |
|---|
Gene and protein annotation
| Transcript_name: | X06989 |
|---|
| Distance: | -4 |
|---|
| GeneID: | 351 |
|---|
| HGNC/MGI_ID: | HGNC:620 |
|---|
| UniProt_ID: | |
|---|
| |
| Gene_name: | amyloid beta precursor protein |
|---|
| Gene_symbol: | APP |
|---|
| Gene_synonyms: | alpha-sAPP |
|---|
| Gene_source: | HGNC:620 |
|---|
|
Transcript annotation
| Transcript_name: | X06989 |
|---|
| Distance: | -4 |
|---|
| Num_trans: | 47 |
|---|
| All_trans: | X06989:-4 ENST00000474136.5:-12 BC004369:-12 ENST00000354192.7:-13 AF282245:-13 BC065529:-17 BC065523:-17 MA353526:27 LF214042:-32 MA449619:-32 ENST00000348990.9:-33 Y00264:-33 AK297412:-33 AK294534:-33 AK298861:-33 ENST00000346798.8:-36 NM_001136129:-36 NM_000484:-36 NM_201414:-36 NM_201413:-36 NM_001204302:-36 NM_001204301:-36 NM_001204303:-36 NM_001136130:-36 NM_001385253:-36 M35675:-36 AK297229:49 AK312326:49 ENST00000357903.7:-53 ENST00000358918.7:66 ENST00000439274.6:79 LF385141:-86 MA620718:-86 HM005315:93 AB384791:108 EU832797:113 GQ129348:113 KJ901289:113 LF213391:258 MA448968:258 LF210650:-326 MA446227:-326 ENST00000359726.7:-394 NM_001136131:-394 LF385472:-394 MA621049:-394 AK296229:-394 |
|---|
TATA-Box annotation
| Distance to TSS: | 33 |
|---|
| Nearest PromoterID: | NM_001269041 |
|---|
| Entrez ID: | 140690 |
|---|
| Nearest Unigene: | Hs.131543 |
|---|
| Nearest Refseq: | NM_080618 |
|---|
| Nearest Ensembl: | ENSG00000124092 |
|---|
| Gene Name: | amyloid beta precursor protein |
|---|
| Gene Alias: | BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 |
|---|
| Gene Description: | CCCTC-binding factor like |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.05 |
|---|
| GC%: | 0.711443 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
