Basic information about the TSS
| TSS ID: | hg_238262.1 |
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| Species: | human |
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| Chr: | chr20 |
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| TSS Classification: | yes |
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| Start: | 57489123 |
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| End: | 57489128 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 26170731 |
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| End of the center position in the TSS region: | 26170732 |
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Gene and protein annotation
| Transcript_name: | X06989 |
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| Distance: | -6 |
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| GeneID: | 351 |
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| HGNC/MGI_ID: | HGNC:620 |
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| UniProt_ID: | |
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| Gene_name: | amyloid beta precursor protein |
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| Gene_symbol: | APP |
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| Gene_synonyms: | alpha-sAPP |
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| Gene_source: | HGNC:620 |
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Transcript annotation
| Transcript_name: | X06989 |
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| Distance: | -6 |
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| Num_trans: | 47 |
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| All_trans: | X06989:-6 ENST00000474136.5:-14 BC004369:-14 ENST00000354192.7:-15 AF282245:-15 BC065529:-19 BC065523:-19 MA353526:26 LF214042:-34 MA449619:-34 ENST00000348990.9:-35 Y00264:-35 AK297412:-35 AK294534:-35 AK298861:-35 ENST00000346798.8:-38 NM_001136129:-38 NM_000484:-38 NM_201414:-38 NM_201413:-38 NM_001204302:-38 NM_001204301:-38 NM_001204303:-38 NM_001136130:-38 NM_001385253:-38 M35675:-38 AK297229:48 AK312326:48 ENST00000357903.7:-55 ENST00000358918.7:65 ENST00000439274.6:78 LF385141:-88 MA620718:-88 HM005315:92 AB384791:107 EU832797:112 GQ129348:112 KJ901289:112 LF213391:257 MA448968:257 LF210650:-328 MA446227:-328 ENST00000359726.7:-396 NM_001136131:-396 LF385472:-396 MA621049:-396 AK296229:-396 |
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TATA-Box annotation
| Distance to TSS: | 35741 |
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| Nearest PromoterID: | NM_001269041 |
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| Entrez ID: | 140690 |
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| Nearest Unigene: | Hs.131543 |
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| Nearest Refseq: | NM_080618 |
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| Nearest Ensembl: | ENSG00000124092 |
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| Gene Name: | amyloid beta precursor protein |
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| Gene Alias: | BORIS|CT27|CTCF-T|HMGB1L1|dJ579F20.2 |
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| Gene Description: | CCCTC-binding factor like |
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| Gene Type: | protein-coding |
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| CpG%: | 0.04 |
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| GC%: | 0.462687 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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