Personal tools

TSS:Hg 168280.1

From referenceTSS

Revision as of 14:26, 10 March 2018 by Autoedit (talk | contribs) (Created page with "{{TSSDetail |all_trans=AK021780:0 ENST00000397625.8:-3 uc002jso.4:-3 BC047003:-3 AK314541:26 ENST00000585429.1:61 uc060kmf.1:61 AB011157:83 BC066654:83 AB073711:89 KJ893343:89...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_168280.1
Species:human
Chr:chr17
TSS Classification:yes
Start:76726563
End:76726587
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:AK021780
Distance:0
GeneID:23210
HGNC/MGI_ID:HGNC:19355
UniProt_ID:
Gene_name:jumonji domain containing 6
Gene_symbol:JMJD6
Gene_synonyms:KIAA0585 PTDSR1
Gene_source:HGNC:19355



Transcript annotation


Transcript_name:AK021780
Distance:0
Num_trans:25
All_trans:AK021780:0 ENST00000397625.8:-3 uc002jso.4:-3 BC047003:-3 AK314541:26 ENST00000585429.1:61 uc060kmf.1:61 AB011157:83 BC066654:83 AB073711:89 KJ893343:89 AB383913:90 ENST00000445478.6:-92 uc002jsn.2:-92 AK294816:-92 ENST00000542934.5:-197 ENST00000303996.10:-197 uc060kmc.1:-197 uc060kmd.1:-197 EF527406:-197 EF527407:-197 ENST00000617192.4:-212 NM_001081461:-212 NM_015167:-212 uc060kmb.1:-212



TATA-Box annotation


Distance to TSS:224
Nearest PromoterID:NM_015167
Entrez ID:23210
Nearest Unigene:Hs.514505
Nearest Refseq:NM_015167
Nearest Ensembl:ENSG00000070495
Gene Name:jumonji domain containing 6
Gene Alias:PSR
Gene Description:arginine demethylase and lysine hydroxylase
Gene Type:protein-coding
CpG%:0.115
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-38(CGACTTTAAAGG,-,0.00),-37(GACTTTAAAGGC,-,0.00),-36(ACTTTAAAGGCG,+,0.00)"