Personal tools

TSS:Hg 107651.1

From referenceTSS

Revision as of 10:29, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_107651.1
Species:human
Chr:chr10
TSS Classification:yes
Start:128047559
End:128047599
Strand:+
TSS Score:1
Start of the center position in the TSS region:128047579
End of the center position in the TSS region:128047580



Gene and protein annotation


Transcript_name:ENST00000306042.9 uc001lkd.4
Distance:0
GeneID:5791
HGNC/MGI_ID:HGNC:9669
UniProt_ID:P23469
Gene_name:"protein tyrosine phosphatase, receptor type E"
Gene_symbol:PTPRE
Gene_synonyms:PTPE
Gene_source:HGNC:9669



Transcript annotation


Transcript_name:ENST00000306042.9 uc001lkd.4
Distance:0
Num_trans:17
All_trans:ENST00000306042.9:0 uc001lkd.4:0 NM_130435:-11 BC071573:12 U36623:14 AK290414:14 BX648180:-17 ENST00000487428.1:20 uc057wuu.1:20 ENST00000495530.5:30 uc057wuv.1:30 ENST00000479896.1:32 uc057wuw.1:32 AJ430580:32 AJ315969:41 ENST00000467366.1:-154 uc057wut.1:-154



TATA-Box annotation


Distance to TSS:30
Nearest PromoterID:NM_001323357
Entrez ID:5791
Nearest Unigene:Hs.127022
Nearest Refseq:NM_006504
Nearest Ensembl:ENSG00000132334
Gene Name:"protein tyrosine phosphatase, receptor type E"
Gene Alias:HPTPE
Gene Description:"protein tyrosine phosphatase, receptor type E"
Gene Type:protein-coding
CpG%:0.025
GC%:0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):