Personal tools

TSS:Hg 121800.1

From referenceTSS

Revision as of 21:53, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_121800.1
Species:human
Chr:chr11
TSS Classification:yes
Start:89491470
End:89491481
Strand:-
TSS Score:1
Start of the center position in the TSS region:89491475
End of the center position in the TSS region:89491476



Gene and protein annotation


Transcript_name:ENST00000263317.8 uc001pct.4 AB041035
Distance:-4
GeneID:50507
HGNC/MGI_ID:HGNC:7891
UniProt_ID:Q9NPH5
Gene_name:NADPH oxidase 4
Gene_symbol:NOX4
Gene_synonyms:KOX KOX-1
Gene_source:HGNC:7891



Transcript annotation


Transcript_name:ENST00000263317.8 uc001pct.4 AB041035
Distance:-4
Num_trans:44
All_trans:ENST00000263317.8:-4 uc001pct.4:-4 AB041035:-4 ENST00000525278.1:77 uc058gje.1:77 ENST00000393282.2:-84 NM_001143836:-84 NM_001291926:-84 NM_016931:-84 NR_120406:-84 uc058gjf.1:-84 BC051371:-84 ENST00000525196.5:111 uc009yvp.4:111 BC034780:111 ENST00000529343.5:114 uc058gjd.1:114 AF254621:139 ENST00000534731.5:143 ENST00000527626.5:143 uc001pcv.4:143 uc010rtu.3:143 AK291830:143 AK298376:143 BC040105:153 AK311389:178 JF432404:221 KJ893751:221 CU691812:222 ENST00000531342.5:225 ENST00000375979.7:225 uc001pcw.4:225 uc001pcx.4:225 AF261943:225 AJ704725:225 AJ704726:225 AJ704727:225 AJ704728:225 AJ704729:225 AY288918:225 ENST00000343727.9:340 uc058gja.1:340 NM_001291927:493 AK298328:493



TATA-Box annotation


Distance to TSS:89
Nearest PromoterID:NM_001143836
Entrez ID:50507
Nearest Unigene:Hs.371036
Nearest Refseq:NM_016931
Nearest Ensembl:ENSG00000086991
Gene Name:NADPH oxidase 4
Gene Alias:KOX
Gene Description:NADPH oxidase 4
Gene Type:protein-coding
CpG%:0.105
GC%:0.746269
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):