Personal tools

TSS:Hg 224229.1

From referenceTSS

Revision as of 00:25, 12 May 2019 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_224229.1
Species:human
Chr:chr10
TSS Classification:yes
Start:17229086
End:17229122
Strand:+
TSS Score:1
Start of the center position in the TSS region:17229104
End of the center position in the TSS region:17229105



Gene and protein annotation


Transcript_name:ENST00000224237.9 ENST00000487938.5 uc057sbc.1 uc057sbd.1 AK222507 AK222602 AK056766 AK091813 AK097336 AK098444 EU794672
Distance:156
GeneID:7431
HGNC/MGI_ID:HGNC:12692
UniProt_ID:B0YJC4 B3KRK8 V9HWE1
Gene_name:vimentin
Gene_symbol:VIM
Gene_synonyms:
Gene_source:HGNC:12692



Transcript annotation


Transcript_name:ENST00000224237.9 ENST00000487938.5 uc057sbc.1 uc057sbd.1 AK222507 AK222602 AK056766 AK091813 AK097336 AK098444 EU794672
Distance:156
Num_trans:29
All_trans:ENST00000224237.9:156 ENST00000487938.5:156 uc057sbc.1:156 uc057sbd.1:156 AK222507:156 AK222602:156 AK056766:156 AK091813:156 AK097336:156 AK098444:156 EU794672:156 X16478:157 AK222482:158 ENST00000485947.1:169 uc057sbe.1:169 AF328728:173 BC030573:177 BC000163:177 Z19554:182 ENST00000497849.1:-218 uc057sbb.1:-218 X56134:258 AK290643:276 AB590763:298 CU674070:300 KJ892377:300 CR407690:301 KU178388:301 KU178389:301



TATA-Box annotation


Distance to TSS:845
Nearest PromoterID:NM_003380
Entrez ID:7431
Nearest Unigene:Hs.455493
Nearest Refseq:NM_003380
Nearest Ensembl:ENSG00000026025
Gene Name:vimentin
Gene Alias:CTRCT30
Gene Description:vimentin
Gene Type:protein-coding
CpG%:0.07
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):