Basic information about the TSS
| TSS ID: | hg_101405.1 |
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| Species: | human |
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| Chr: | chr9 |
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| TSS Classification: | yes |
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| Start: | 92115429 |
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| End: | 92115458 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 92115443 |
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| End of the center position in the TSS region: | 92115444 |
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Gene and protein annotation
| Transcript_name: | ENST00000262554.7 NM_001368273 NM_001281303 NM_006415 NM_001368272 NM_178324 |
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| Distance: | 17 |
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| GeneID: | 10558 |
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| HGNC/MGI_ID: | HGNC:11277 |
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| UniProt_ID: | A0A024R277 O15269 Q6NUL7 |
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| Gene_name: | serine palmitoyltransferase long chain base subunit 1 |
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| Gene_symbol: | SPTLC1 |
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| Gene_synonyms: | HSAN1 LCB1 SPTI hLCB1 |
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| Gene_source: | HGNC:11277 |
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Transcript annotation
| Transcript_name: | ENST00000262554.7 NM_001368273 NM_001281303 NM_006415 NM_001368272 NM_178324 |
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| Distance: | 17 |
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| Num_trans: | 26 |
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| All_trans: | ENST00000262554.7:17 NM_001368273:17 NM_001281303:17 NM_006415:17 NM_001368272:17 NM_178324:17 AK098344:22 LF384915:22 MA620492:22 ENST00000482632.5:46 ENST00000337841.4:47 BC007085:47 ENST00000488921.5:48 BC068537:52 AK299153:52 ENST00000644140.1:56 AK291546:56 ENST00000646534.1:57 Y08685:60 KJ902128:60 CU686661:60 KJ898242:60 AB209757:74 ENST00000461132.1:92 LF331673:411 MA567250:411 |
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TATA-Box annotation
| Distance to TSS: | -31 |
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| Nearest PromoterID: | NM_001281303 |
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| Entrez ID: | 10558 |
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| Nearest Unigene: | Hs.90458 |
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| Nearest Refseq: | NM_006415 |
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| Nearest Ensembl: | ENSG00000090054 |
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| Gene Name: | serine palmitoyltransferase long chain base subunit 1 |
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| Gene Alias: | HSAN1|HSN1|LBC1|LCB1|SPT1|SPTI |
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| Gene Description: | serine palmitoyltransferase long chain base subunit 1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.11 |
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| GC%: | 0.666667 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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