Personal tools

TSS:Hg 104454.1

From referenceTSS

Revision as of 17:51, 15 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_104454.1
Species:human
Chr:chr10
TSS Classification:yes
Start:27504280
End:27504318
Strand:+
TSS Score:1
Start of the center position in the TSS region:27504299
End of the center position in the TSS region:27504300



Gene and protein annotation


Transcript_name:ENST00000490236.2 ENST00000356940.11 NM_021252 NM_001256415 NM_001256412 NM_001256411 NM_001256410 NR_046172 AY574034 AK297629 AK299457 AK295443 BC029350 AF136974 AF087860
Distance:0
GeneID:22931
HGNC/MGI_ID:HGNC:14244
UniProt_ID:B7Z4P9 B7Z5V3 Q9NP72
Gene_name:RAB18, member RAS oncogene family
Gene_symbol:RAB18
Gene_synonyms:
Gene_source:HGNC:14244



Transcript annotation


Transcript_name:ENST00000490236.2 ENST00000356940.11 NM_021252 NM_001256415 NM_001256412 NM_001256411 NM_001256410 NR_046172 AY574034 AK297629 AK299457 AK295443 BC029350 AF136974 AF087860
Distance:0
Num_trans:35
All_trans:ENST00000490236.2:0 ENST00000356940.11:0 NM_021252:0 NM_001256415:0 NM_001256412:0 NM_001256411:0 NM_001256410:0 NR_046172:0 AY574034:0 AK297629:0 AK299457:0 AK295443:0 BC029350:0 AF136974:0 AF087860:0 BC015014:2 AL136734:4 ENST00000375802.7:10 LP895194:-13 AK223153:29 AF274957:37 ENST00000621805.4:52 AB464117:52 AM393142:52 BT009840:52 CU677165:52 AF498950:52 CR533455:52 AF137372:52 AK001555:52 ENST00000465772.5:59 ENST00000484281.1:76 ENST00000535776.5:-107 ENST00000611151.4:-107 ENST00000423465.1:301



TATA-Box annotation


Distance to TSS:-5
Nearest PromoterID:NM_001256411
Entrez ID:22931
Nearest Unigene:Hs.406799
Nearest Refseq:NM_021252
Nearest Ensembl:ENSG00000099246
Gene Name:RAB18, member RAS oncogene family
Gene Alias:RAB18LI1|WARBM3
Gene Description:RAB18, member RAS oncogene family
Gene Type:protein-coding
CpG%:0.08
GC%:0.666667
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):