Basic information about the TSS
| TSS ID: | hg_105362.1 |
|---|
| Species: | human |
|---|
| Chr: | chr10 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 69801893 |
|---|
| End: | 69801947 |
|---|
| Strand: | + |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 69801920 |
|---|
| End of the center position in the TSS region: | 69801921 |
|---|
Gene and protein annotation
| Transcript_name: | ENST00000645393.2 ENST00000398978.8 ENST00000673830.1 ENST00000479733.5 ENST00000354547.7 NM_080802 NM_001368895 NM_001368896 NM_001320951 NM_001368882 NM_080805 NM_080800 NM_080801 NM_080798 NM_001368883 NM_001368885 NM_001368886 NM_001368898 NM_001368897 NM_001130103 NM_001368884 BC139913 AJ293624 |
|---|
| Distance: | 0 |
|---|
| GeneID: | 1305 |
|---|
| HGNC/MGI_ID: | HGNC:2190 |
|---|
| UniProt_ID: | A0A2R8YGI3 E7EX21 Q5TAT6 |
|---|
| |
| Gene_name: | collagen type XIII alpha 1 chain |
|---|
| Gene_symbol: | COL13A1 |
|---|
| Gene_synonyms: | |
|---|
| Gene_source: | HGNC:2190 |
|---|
|
Transcript annotation
| Transcript_name: | ENST00000645393.2 ENST00000398978.8 ENST00000673830.1 ENST00000479733.5 ENST00000354547.7 NM_080802 NM_001368895 NM_001368896 NM_001320951 NM_001368882 NM_080805 NM_080800 NM_080801 NM_080798 NM_001368883 NM_001368885 NM_001368886 NM_001368898 NM_001368897 NM_001130103 NM_001368884 BC139913 AJ293624 |
|---|
| Distance: | 0 |
|---|
| Num_trans: | 32 |
|---|
| All_trans: | ENST00000645393.2:0 ENST00000398978.8:0 ENST00000673830.1:0 ENST00000479733.5:0 ENST00000354547.7:0 NM_080802:0 NM_001368895:0 NM_001368896:0 NM_001320951:0 NM_001368882:0 NM_080805:0 NM_080800:0 NM_080801:0 NM_080798:0 NM_001368883:0 NM_001368885:0 NM_001368886:0 NM_001368898:0 NM_001368897:0 NM_001130103:0 NM_001368884:0 BC139913:0 AJ293624:0 ENST00000357811.8:-14 ENST00000674121.1:102 ENST00000673842.1:124 ENST00000520267.5:171 ENST00000398969.7:171 BC136385:171 ENST00000517713.5:477 ENST00000522165.5:477 ENST00000520133.5:477 |
|---|
TATA-Box annotation
| Distance to TSS: | 14 |
|---|
| Nearest PromoterID: | NM_080801 |
|---|
| Entrez ID: | 1305 |
|---|
| Nearest Unigene: | Hs.695934 |
|---|
| Nearest Refseq: | NM_005203 |
|---|
| Nearest Ensembl: | ENSG00000197467 |
|---|
| Gene Name: | collagen type XIII alpha 1 chain |
|---|
| Gene Alias: | CMS19|COLXIIIA1 |
|---|
| Gene Description: | collagen type XIII alpha 1 chain |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.08 |
|---|
| GC%: | 0.666667 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
