Basic information about the TSS
| TSS ID: | hg_243230.1 |
|---|
| Species: | human |
|---|
| Chr: | chr9 |
|---|
| TSS Classification: | no |
|---|
| |
| Start: | 32989908 |
|---|
| End: | 32989909 |
|---|
| Strand: | - |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 32989908 |
|---|
| End of the center position in the TSS region: | 32989909 |
|---|
Gene and protein annotation
| Transcript_name: | AY208841 |
|---|
| Distance: | 12 |
|---|
| GeneID: | 54840 |
|---|
| HGNC/MGI_ID: | HGNC:15984 |
|---|
| UniProt_ID: | |
|---|
| |
| Gene_name: | aprataxin |
|---|
| Gene_symbol: | APTX |
|---|
| Gene_synonyms: | AOA AOA1 EAOH EOAHA FLJ20157 |
|---|
| Gene_source: | HGNC:15984 |
|---|
|
Transcript annotation
| Transcript_name: | AY208841 |
|---|
| Distance: | 12 |
|---|
| Num_trans: | 25 |
|---|
| All_trans: | AY208841:12 AY208838:14 BC001628:14 AJ565853:-42 AJ565854:-42 AJ565855:-42 AJ575566:-42 AB603741:43 LF354211:58 MA589788:58 ENST00000673211.1:-179 ENST00000672615.1:-179 ENST00000673485.1:-179 ENST00000672476.1:-179 ENST00000673171.1:-179 ENST00000672152.1:-179 AK000164:-179 AY302067:-179 AY302068:-179 AY302069:-179 AY302070:-179 AY302071:-179 AY302072:-179 AY302073:-179 AY302074:-179 |
|---|
TATA-Box annotation
| Distance to TSS: | 8549 |
|---|
| Nearest PromoterID: | NR_161217 |
|---|
| Entrez ID: | 56260 |
|---|
| Nearest Unigene: | Hs.661238 |
|---|
| Nearest Refseq: | NM_019607 |
|---|
| Nearest Ensembl: | ENSG00000213865 |
|---|
| Gene Name: | aprataxin |
|---|
| Gene Alias: | - |
|---|
| Gene Description: | chromosome 8 open reading frame 44 |
|---|
| Gene Type: | ncRNA |
|---|
| CpG%: | 0 |
|---|
| GC%: | 0.348259 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -95(GCTTTTAGGGTG,+,0.00) |
|---|
