Basic information about the TSS
| TSS ID: | mm_100170.1 |
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| Species: | mouse |
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| Chr: | chr11 |
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| TSS Classification: | yes |
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| Start: | 116531996 |
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| End: | 116532014 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 116532005 |
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| End of the center position in the TSS region: | 116532006 |
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Gene and protein annotation
| Transcript_name: | ENSMUST00000100201.9 NM_001172475 AF068748 |
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| Distance: | -86 |
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| GeneID: | 20698 |
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| HGNC/MGI_ID: | MGI:1316649 |
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| UniProt_ID: | O88885 Q8CI15 |
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| Gene_name: | sphingosine kinase 1 |
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| Gene_symbol: | Sphk1 |
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| Gene_synonyms: | 1110006G24Rik SK1 |
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| Gene_source: | MGI:1316649 |
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Transcript annotation
| Transcript_name: | ENSMUST00000100201.9 NM_001172475 AF068748 |
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| Distance: | -86 |
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| Num_trans: | 20 |
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| All_trans: | ENSMUST00000100201.9:-86 NM_001172475:-86 AF068748:-86 AK216506:123 NM_001372486:-160 ENSMUST00000106387.8:-253 ENSMUST00000106386.7:430 NM_001172473:430 ENSMUST00000134834.7:437 NM_001372488:437 NM_001372489:437 NM_025367:437 NM_001172472:437 NM_001372487:437 AK028667:437 ENSMUST00000145737.7:440 AK160900:441 ENSMUST00000155102.7:443 AK155332:446 ENSMUST00000063446.12:459 |
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TATA-Box annotation
| Distance to TSS: | 94 |
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| Nearest PromoterID: | NM_001172475 |
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| Entrez ID: | 20698 |
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| Nearest Unigene: | Mm.20944 |
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| Nearest Refseq: | NM_011451 |
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| Nearest Ensembl: | ENSMUSG00000061878 |
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| Gene Name: | sphingosine kinase 1 |
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| Gene Alias: | 1110006G24Rik|Sk1|Spk1 |
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| Gene Description: | sphingosine kinase 1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.05 |
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| GC%: | 0.562189 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 54(GACTTTAAGAAG,-,0.00) |
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