Basic information about the TSS
| TSS ID: | mm_100171.1 |
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| Species: | mouse |
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| Chr: | chr11 |
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| TSS Classification: | yes |
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| Start: | 116532422 |
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| End: | 116532425 |
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| Strand: | + |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 116532423 |
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| End of the center position in the TSS region: | 116532424 |
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Gene and protein annotation
| Transcript_name: | ENSMUST00000106386.7 NM_001172473 |
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| Distance: | 19 |
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| GeneID: | 20698 |
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| HGNC/MGI_ID: | MGI:1316649 |
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| UniProt_ID: | Q8CI15 |
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| Gene_name: | sphingosine kinase 1 |
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| Gene_symbol: | Sphk1 |
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| Gene_synonyms: | 1110006G24Rik SK1 |
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| Gene_source: | MGI:1316649 |
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Transcript annotation
| Transcript_name: | ENSMUST00000106386.7 NM_001172473 |
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| Distance: | 19 |
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| Num_trans: | 16 |
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| All_trans: | ENSMUST00000106386.7:19 NM_001172473:19 ENSMUST00000134834.7:26 NM_001372488:26 NM_001372489:26 NM_025367:26 NM_001172472:26 NM_001372487:26 AK028667:26 ENSMUST00000145737.7:29 AK160900:30 ENSMUST00000155102.7:32 AK155332:35 ENSMUST00000063446.12:48 AK216506:-286 ENSMUST00000063396.9:500 |
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TATA-Box annotation
| Distance to TSS: | -20 |
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| Nearest PromoterID: | NM_001172473 |
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| Entrez ID: | 20698 |
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| Nearest Unigene: | Mm.20944 |
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| Nearest Refseq: | NM_011451 |
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| Nearest Ensembl: | ENSMUSG00000061878 |
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| Gene Name: | sphingosine kinase 1 |
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| Gene Alias: | 1110006G24Rik|Sk1|Spk1 |
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| Gene Description: | sphingosine kinase 1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.065 |
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| GC%: | 0.636816 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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