Personal tools

TSS:Mm 10087.1

From referenceTSS

Revision as of 16:27, 19 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_10087.1
Species:mouse
Chr:chr2
TSS Classification:yes
Start:3118407
End:3118476
Strand:+
TSS Score:1
Start of the center position in the TSS region:3118441
End of the center position in the TSS region:3118442



Gene and protein annotation


Transcript_name:ENSMUST00000091505.10 AK032237 BC138175 BC145171
Distance:0
GeneID:269233
HGNC/MGI_ID:MGI:2442917
UniProt_ID:A2ATK8
Gene_name:family with sequence similarity 171, member A1
Gene_symbol:Fam171a1
Gene_synonyms:9630050M13Rik
Gene_source:MGI:2442917



Transcript annotation


Transcript_name:ENSMUST00000091505.10 AK032237 BC138175 BC145171
Distance:0
Num_trans:10
All_trans:ENSMUST00000091505.10:0 AK032237:0 BC138175:0 BC145171:0 ENSMUST00000115099.8:-26 NM_001361386:-26 NM_001081161:-26 ENSMUST00000062934.6:209 NM_001347067:209 AK077831:209



TATA-Box annotation


Distance to TSS:60
Nearest PromoterID:NM_001361386
Entrez ID:269233
Nearest Unigene:Mm.23044
Nearest Refseq:NM_001081161
Nearest Ensembl:ENSMUSG00000050530
Gene Name:family with sequence similarity 171, member A1
Gene Alias:9630050M13Rik|AA409679
Gene Description:family with sequence similarity 171, member A1
Gene Type:protein-coding
CpG%:0.175
GC%:0.825871
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):