Basic information about the TSS
| TSS ID: | mm_163280.1 |
|---|
| Species: | mouse |
|---|
| Chr: | chr11 |
|---|
| TSS Classification: | yes |
|---|
| |
| Start: | 116532498 |
|---|
| End: | 116532501 |
|---|
| Strand: | + |
|---|
| TSS Score: | 1 |
|---|
|
| Start of the center position in the TSS region: | 116532499 |
|---|
| End of the center position in the TSS region: | 116532500 |
|---|
Gene and protein annotation
| Transcript_name: | ENSMUST00000063446.12 |
|---|
| Distance: | -26 |
|---|
| GeneID: | 20698 |
|---|
| HGNC/MGI_ID: | MGI:1316649 |
|---|
| UniProt_ID: | Q8CI15 |
|---|
| |
| Gene_name: | sphingosine kinase 1 |
|---|
| Gene_symbol: | Sphk1 |
|---|
| Gene_synonyms: | 1110006G24Rik SK1 |
|---|
| Gene_source: | MGI:1316649 |
|---|
|
Transcript annotation
| Transcript_name: | ENSMUST00000063446.12 |
|---|
| Distance: | -26 |
|---|
| Num_trans: | 16 |
|---|
| All_trans: | ENSMUST00000063446.12:-26 AK155332:-39 ENSMUST00000155102.7:-42 AK160900:-44 ENSMUST00000145737.7:-45 ENSMUST00000134834.7:-48 NM_001372488:-48 NM_001372489:-48 NM_025367:-48 NM_001172472:-48 NM_001372487:-48 AK028667:-48 ENSMUST00000106386.7:-55 NM_001172473:-55 AK216506:-362 ENSMUST00000063396.9:424 |
|---|
TATA-Box annotation
| Distance to TSS: | 56 |
|---|
| Nearest PromoterID: | NM_001172472 |
|---|
| Entrez ID: | 20698 |
|---|
| Nearest Unigene: | Mm.20944 |
|---|
| Nearest Refseq: | NM_011451 |
|---|
| Nearest Ensembl: | ENSMUSG00000061878 |
|---|
| Gene Name: | sphingosine kinase 1 |
|---|
| Gene Alias: | 1110006G24Rik|Sk1|Spk1 |
|---|
| Gene Description: | sphingosine kinase 1 |
|---|
| Gene Type: | protein-coding |
|---|
| CpG%: | 0.045 |
|---|
| GC%: | 0.597015 |
|---|
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
|---|
