Basic information about the TSS
| TSS ID: | mm_168435.1 |
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| Species: | mouse |
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| Chr: | chr11 |
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| TSS Classification: | yes |
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| Start: | 3539280 |
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| End: | 3539284 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 3539282 |
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| End of the center position in the TSS region: | 3539283 |
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Gene and protein annotation
| Transcript_name: | ENSMUST00000020721.14 ENSMUST00000170588.7 NM_001284427 NM_001284429 NM_001159284 NM_013870 NM_001284428 AK030932 AK138898 |
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| Distance: | -8 |
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| GeneID: | 29856 |
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| HGNC/MGI_ID: | MGI:1354727 |
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| UniProt_ID: | Q921U8 |
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| Gene_name: | smoothelin |
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| Gene_symbol: | Smtn |
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| Gene_synonyms: | |
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| Gene_source: | MGI:1354727 |
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Transcript annotation
| Transcript_name: | ENSMUST00000020721.14 ENSMUST00000170588.7 NM_001284427 NM_001284429 NM_001159284 NM_013870 NM_001284428 AK030932 AK138898 |
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| Distance: | -8 |
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| Num_trans: | 22 |
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| All_trans: | ENSMUST00000020721.14:-8 ENSMUST00000170588.7:-8 NM_001284427:-8 NM_001284429:-8 NM_001159284:-8 NM_013870:-8 NM_001284428:-8 AK030932:-8 AK138898:-8 AK085412:28 ENSMUST00000154861.7:29 ENSMUST00000136243.1:30 AK166385:30 AK170516:30 ENSMUST00000151804.1:32 ENSMUST00000075118.9:42 AF064236:42 AJ010305:42 BC010599:48 BC066192:111 BC069836:111 BC069839:111 |
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TATA-Box annotation
| Distance to TSS: | 10 |
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| Nearest PromoterID: | NM_001284428 |
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| Entrez ID: | 29856 |
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| Nearest Unigene: | Mm.188516 |
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| Nearest Refseq: | NM_013870 |
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| Nearest Ensembl: | ENSMUSG00000020439 |
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| Gene Name: | smoothelin |
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| Gene Alias: | smsmo |
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| Gene Description: | smoothelin |
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| Gene Type: | protein-coding |
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| CpG%: | 0.065 |
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| GC%: | 0.641791 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | |
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