Personal tools

TSS:Mm 49108.1

From referenceTSS

Revision as of 08:46, 21 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_49108.1
Species:mouse
Chr:chr6
TSS Classification:yes
Start:8259379
End:8259460
Strand:+
TSS Score:1
Start of the center position in the TSS region:8259419
End of the center position in the TSS region:8259420



Gene and protein annotation


Transcript_name:ENSMUST00000162034.7 ENSMUST00000160705.7 ENSMUST00000159433.7 ENSMUST00000161400.1 ENSMUST00000162564.6 AK009885 AF374476
Distance:0
GeneID:100036521
HGNC/MGI_ID:MGI:3840148 MGI:5753638
UniProt_ID:E0CX23 E0CXP6 E0CYC9 E0CZ38
Gene_name:UMAP1-MVP12 associated (UMA) domain containing 1; predicted gene 45062
Gene_symbol:Gm45062 Umad1
Gene_synonyms:Gm16039
Gene_source:MGI:3840148 MGI:5753638



Transcript annotation


Transcript_name:ENSMUST00000162034.7 ENSMUST00000160705.7 ENSMUST00000159433.7 ENSMUST00000161400.1 ENSMUST00000162564.6 AK009885 AF374476
Distance:0
Num_trans:13
All_trans:ENSMUST00000162034.7:0 ENSMUST00000160705.7:0 ENSMUST00000159433.7:0 ENSMUST00000161400.1:0 ENSMUST00000162564.6:0 AK009885:0 AF374476:0 ENSMUST00000159378.7:-30 EU711418:-73 AK158918:-83 ENSMUST00000159335.7:-92 NM_001302353:-92 NM_001302354:-92



TATA-Box annotation


Distance to TSS:132
Nearest PromoterID:NM_001302354
Entrez ID:100036521
Nearest Unigene:Mm.446106
Nearest Refseq:NM_001302353
Nearest Ensembl:ENSMUSG00000089862
Gene Name:UMAP1-MVP12 associated (UMA) domain containing 1; predicted gene 45062
Gene Alias:Gm16039
Gene Description:UMAP1-MVP12 associated (UMA) domain containing 1
Gene Type:protein-coding
CpG%:0.095
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):