Personal tools

TSS:Hg 118119.1

From referenceTSS

Revision as of 06:37, 9 March 2018 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:hg_118119.1
Species:human
Chr:chr11
TSS Classification:yes
Start:1997835
End:1997848
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:AK056774 AK092486 AK311497 AK309887
Distance:0
GeneID:283120
HGNC/MGI_ID:HGNC:4713
UniProt_ID:Q96MK8
Gene_name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene_symbol:H19
Gene_synonyms:ASM ASM1 D11S813E LINC00008 NCRNA00008
Gene_source:HGNC:4713



Transcript annotation


Transcript_name:AK056774 AK092486 AK311497 AK309887
Distance:0
Num_trans:27
All_trans:AK056774:0 AK092486:0 AK311497:0 AK309887:0 ENST00000446406.5:9 uc057xvt.1:9 ENST00000431095.5:21 uc057xvw.1:21 ENST00000412788.5:22 uc001lva.5:22 ENST00000414790.5:-27 NR_131223:-27 NR_002196:-27 uc021qby.2:-27 ENST00000422826.1:39 ENST00000411754.5:39 uc057xvs.1:39 uc057xvv.1:39 BC040073:58 BC040852:75 BC002550:180 BC115700:333 BC053636:362 BC110657:362 ENST00000439725.5:376 uc021qca.2:376 BC015952:479



TATA-Box annotation


Distance to TSS:33
Nearest PromoterID:NR_002196
Entrez ID:283120
Nearest Unigene:Hs.533566
Nearest Refseq:NR_002196
Nearest Ensembl:ENSG00000130600
Gene Name:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene Alias:ASM
Gene Description:"H19, imprinted maternally expressed transcript (non-protein coding)"
Gene Type:ncRNA
CpG%:0.04
GC%:0.686567
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):