Basic information about the TSS
| TSS ID: | hg_101807.1 |
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| Species: | human |
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| Chr: | chr9 |
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| TSS Classification: | yes |
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| Start: | 104928101 |
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| End: | 104928112 |
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| Strand: | - |
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| TSS Score: | 1 |
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| Start of the center position in the TSS region: | 104928106 |
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| End of the center position in the TSS region: | 104928107 |
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Gene and protein annotation
| Transcript_name: | LF354705 MA590282 |
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| Distance: | 0 |
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| GeneID: | 19 |
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| HGNC/MGI_ID: | HGNC:29 |
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| UniProt_ID: | |
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| Gene_name: | ABCA1 |
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| Gene_symbol: | ABCA1 |
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| Gene_synonyms: | TGD |
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| Gene_source: | HGNC:29 |
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Transcript annotation
| Transcript_name: | LF354705 MA590282 |
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| Distance: | 0 |
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| Num_trans: | 22 |
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| All_trans: | LF354705:0 MA590282:0 AF285167:-19 ENST00000423487.6:-27 ENST00000374733.1:-27 BC034824:-27 BC141816:-33 BC142693:-33 AK022254:-41 ENST00000374736.8:-43 ENST00000678995.1:-43 NM_005502:-43 AK024328:-43 LF206462:-45 MA442039:-45 BC146856:46 LP895628:-125 AF258627:-125 LF354704:257 MA590281:257 LF354703:445 MA590280:445 |
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TATA-Box annotation
| Distance to TSS: | 48 |
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| Nearest PromoterID: | NM_005502 |
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| Entrez ID: | 19 |
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| Nearest Unigene: | Hs.659274 |
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| Nearest Refseq: | NM_005502 |
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| Nearest Ensembl: | ENSG00000165029 |
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| Gene Name: | ABCA1 |
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| Gene Alias: | ABC-1|ABC1|CERP|HDLDT1|TGD |
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| Gene Description: | ATP binding cassette subfamily A member 1 |
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| Gene Type: | protein-coding |
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| CpG%: | 0.095 |
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| GC%: | 0.636816 |
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| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -82(ATCTATAAAAGG,-,0.00) |
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