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TSS:Hg 11860.1

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Basic information about the TSS


TSS ID:hg_11860.1
Species:human
Chr:chr1
TSS Classification:yes
Start:39576341
End:39576360
Strand:-
TSS Score:1
Start of the center position in the TSS region:39576350
End of the center position in the TSS region:39576351



Gene and protein annotation


Transcript_name:BC029969
Distance:-41
GeneID:8761
HGNC/MGI_ID:HGNC:8557
UniProt_ID:
Gene_name:poly(A) binding protein cytoplasmic 4
Gene_symbol:PABPC4
Gene_synonyms:APP-1 iPABP
Gene_source:HGNC:8557



Transcript annotation


Transcript_name:BC029969
Distance:-41
Num_trans:19
All_trans:BC029969:-41 ENST00000372862.7:89 U33818:355 ENST00000372857.7:-384 U75686:-384 ENST00000372856.7:-391 BC065540:-391 ENST00000676523.1:418 ENST00000678980.1:418 ENST00000677244.1:418 BC071591:-425 ENST00000531243.2:-427 ENST00000677609.1:429 ENST00000372858.8:-430 ENST00000451091.2:-430 NM_001135653:-430 NM_001135654:-430 NM_003819:-430 BC094755:-430



TATA-Box annotation


Distance to TSS:439
Nearest PromoterID:NM_001135653
Entrez ID:8761
Nearest Unigene:Hs.169900
Nearest Refseq:NM_003819
Nearest Ensembl:ENSG00000090621
Gene Name:poly(A) binding protein cytoplasmic 4
Gene Alias:APP-1|APP1|PABP4|iPABP
Gene Description:poly(A) binding protein cytoplasmic 4
Gene Type:protein-coding
CpG%:0.11
GC%:0.59204
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):48(GCCTCTTAAAGG,-,0.00),49(CCTCTTAAAGGA,+,0.00)