Personal tools

TSS:Mm 100138.1

From referenceTSS

Revision as of 16:09, 19 June 2021 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_100138.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:115975064
End:115975088
Strand:+
TSS Score:1
Start of the center position in the TSS region:115975076
End of the center position in the TSS region:115975077



Gene and protein annotation


Transcript_name:AK144947
Distance:-3
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Gene_name:Itgb4
Gene_symbol:
Gene_synonyms:
Gene_source:



Transcript annotation


Transcript_name:AK144947
Distance:-3
Num_trans:12
All_trans:AK144947:-3 AK142648:-29 ENSMUST00000106460.8:-86 ENSMUST00000151691.7:-222 AK048888:-222 ENSMUST00000169928.7:-340 ENSMUST00000106461.7:-340 NM_133663:-340 NM_001005608:-340 AK147424:-340 ENSMUST00000021107.13:-356 L04678:-356



TATA-Box annotation


Distance to TSS:351
Nearest PromoterID:NM_133663
Entrez ID:192897
Nearest Unigene:Mm.213873
Nearest Refseq:NM_133663
Nearest Ensembl:ENSMUSG00000020758
Gene Name:Itgb4
Gene Alias:AA407042|C230078O20|CD104
Gene Description:integrin beta 4
Gene Type:protein-coding
CpG%:0.125
GC%:0.716418
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):