Personal tools

TSS:Mm 168321.1

From referenceTSS

Revision as of 18:37, 20 June 2021 by Autoedit (talk | contribs)
Jump to: navigation, search

Basic information about the TSS


TSS ID:mm_168321.1
Species:mouse
Chr:chr11
TSS Classification:yes
Start:114668641
End:114668642
Strand:+
TSS Score:1
Start of the center position in the TSS region:114668641
End of the center position in the TSS region:114668642



Gene and protein annotation


Transcript_name:ENSMUST00000082092.4
Distance:-16
GeneID:67671
HGNC/MGI_ID:MGI:1914921
UniProt_ID:Q52KP0
Gene_name:ribosomal protein L38
Gene_symbol:Rpl38
Gene_synonyms:0610025G13Rik Rbt Ts Tss
Gene_source:MGI:1914921



Transcript annotation


Transcript_name:ENSMUST00000082092.4
Distance:-16
Num_trans:20
All_trans:ENSMUST00000082092.4:-16 BC047046:-25 ENSMUST00000106599.7:-33 AK010277:-35 AK151517:-35 BC034339:-38 AK010518:-51 AK012391:-51 BC055346:-51 NM_001048058:-62 NM_001048057:-62 NM_001362918:-62 NM_023372:-62 AK002659:-64 ENSMUST00000077915.9:-94 ENSMUST00000106602.9:-118 AB037665:-118 BC094258:139 BC094644:139 BC081447:155



TATA-Box annotation


Distance to TSS:62
Nearest PromoterID:NM_001048058
Entrez ID:67671
Nearest Unigene:Mm.238817
Nearest Refseq:NM_023372
Nearest Ensembl:ENSMUSG00000057322
Gene Name:ribosomal protein L38
Gene Alias:0610025G13Rik|Rbt|Ts|Tss
Gene Description:ribosomal protein L38
Gene Type:protein-coding
CpG%:0.105
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):